| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0706 |
|---|
| Symbol | |
|---|
| ID | 5596306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1606808 |
|---|
| End bp | 1607701 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640930152 |
|---|
| Product | site-specific recombinase, phage integrase family protein |
|---|
| Protein accession | YP_001467429 |
|---|
| Protein GI | 157164010 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTAA ACGTTAAATT TAAATACTAT GCTGATTTAT ATCTTAAGCT CGGTAAGTCT
GAATGGAAAT TATCGACGTA TTGCAAGAAT AAGGGCATTG TAAAAAATAG GTTAAATGTT
TTCTTTGATT TGGATATTTA CGAAGTAAAG CCTAGCGTTA TTCGTTTGTG GTTAAATTCA
ATTCAAGACG TTTCTAATAA AAGCAAAAAG CACTATTTAA ATTCTCTATC AATGATCTTA
AAGCTTGCCC TGGAAGATGA AATTATTGAT AAAAATCCCA TTATTCATAT TAAAAGCATA
GTTCATAAAA CACCAAGAAT AGAGCCTTTT ACTAGCCAGC AGGTAAATGA TATTTTAAGA
TTATCTACTA GATATAACGA TAAATTTCAA ATTTTTTTAT ATGTTGGTTT CTTTACTGGC
ATGCGGACTG GTGAGATACT ATCTTTAAAG ATGAAAGATA TTGATTTAGA AAATAGGGTT
ATAAATATTA ATTCTACTAG GTCTAGATTT GGCGAGAATA CACCAAAAAC AATTTATTCA
ATTAGAACTA TACCTATTTT GGATAATTTA TATAACAAGC TTAAAAGATA TGTCGAGAAT
TACCAGGATA ATATTTATCT TTTGCAAACT CAATATAACG AGCCTTATAG AGATACTGGC
GTTTTTACTT CTGATTTTTG GAAGCCTATT TTAGACGAGT TAAATTTACC ATATAGGCGA
CTTTATAACA TGCGACATAC TTATGCTACT TCTATGCTTT TTCAAAATTT TGTTACTCCA
GTAGAATTAT CAAAATTATT AGGTCACTCC ACGCCTAAGA TGGTTTATGA TGTCTATGTA
AATTATCTTA ATTCAAACTT AAAAGATTTT AAACGAGATA TTTCTATTTA TTAA
|
|---|
| Protein sequence | MFLNVKFKYY ADLYLKLGKS EWKLSTYCKN KGIVKNRLNV FFDLDIYEVK PSVIRLWLNS
IQDVSNKSKK HYLNSLSMIL KLALEDEIID KNPIIHIKSI VHKTPRIEPF TSQQVNDILR
LSTRYNDKFQ IFLYVGFFTG MRTGEILSLK MKDIDLENRV ININSTRSRF GENTPKTIYS
IRTIPILDNL YNKLKRYVEN YQDNIYLLQT QYNEPYRDTG VFTSDFWKPI LDELNLPYRR
LYNMRHTYAT SMLFQNFVTP VELSKLLGHS TPKMVYDVYV NYLNSNLKDF KRDISIY
|
|---|
| |