| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0680 |
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| Symbol | ispG |
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| ID | 5595911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 735178 |
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| End bp | 736236 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640929301 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001466597 |
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| Protein GI | 157164894 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.954282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAACGAT ACCCGACAAA ACAGATAAAA ATTCGCGATG TTTTAATAGG CGGTGACGCA
CCGATCTCCG TGCAGTCGAT GACATTTTCA AAGACAAAGG ACGTAAAAGG CACGCTAGAG
CAGATACAAA GGCTATATTT TGCAGGCTGT GACATCGTGC GCTGCGCAGT TTTTGACAAA
GAGGACGCCA GCGCGCTAAA GCAGATCGTC GCCGGCTCAC CCATCCCAGT CGTTGCAGAC
ATACATTTTA ACCACACCTA CGCGCTCATC GTTAGCGAAT TTGTCGATGC TATCCGTATA
AATCCAGGCA ACATCGGCTC AGCTAAAAAC ATAAAAGCAG TCGTTGATGC CTGCAAGCAG
CGAAATTTAC CCATCCGCAT AGGCGTAAAT TCTGGCTCGC TTGAAAAGCG GTTTGAAGAC
CGCTACGGCC GCACGGTGGA GGCTATGGTG GAGAGTGCCT TATACAACAT CAAGCTTCTT
GAGGATTTTG ACTTTACGGA TATTAAAATT TCACTTAAAT CAAGCGACGT CGAGCGCACT
ATGCAAGCTT ACAGAGCGCT TCGTCCAAAG ACAAACTACC CATTTCATCT AGGCGTAACA
GAGGCTGGCA CGGCGTTTCA TGCGACTATC AAGTCCGCGA TCGCACTTGG CGGGTTACTA
CTTGAGGGCA TCGGCGATAC GATGAGGGTT AGCATCACGG GCGAGCTTGA AGAGGAGATC
AAAGTCGCAA AGGCGATCTT AAAAGATAGC GGCCGCCAAA AAGAGGGGCT AAACATCATC
TCATGCCCAA CTTGTGGGCG TTTGCAAGCT GATCTCATGG CAGCAGTAAA GCTCGTAGAA
GAAAAGACAA AAGATATAAA AGAGCCGCTA AACGTCTCAG TGATGGGCTG CGTGGTAAAT
GCTATCGGCG AGGCAAAGGG CGCAGACGTA GCCATAGCCT TTGGCAAGGG AAATGGCATG
ATCATGCGCC ACGGCGAAGT GGTCGCAAGG CTGCCTGAGA GCGAGCTTGT GGATAGATTT
TTACAAGAGA TCGACGACGA GATAAAGAGC AGAGGATAA
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| Protein sequence | MQRYPTKQIK IRDVLIGGDA PISVQSMTFS KTKDVKGTLE QIQRLYFAGC DIVRCAVFDK
EDASALKQIV AGSPIPVVAD IHFNHTYALI VSEFVDAIRI NPGNIGSAKN IKAVVDACKQ
RNLPIRIGVN SGSLEKRFED RYGRTVEAMV ESALYNIKLL EDFDFTDIKI SLKSSDVERT
MQAYRALRPK TNYPFHLGVT EAGTAFHATI KSAIALGGLL LEGIGDTMRV SITGELEEEI
KVAKAILKDS GRQKEGLNII SCPTCGRLQA DLMAAVKLVE EKTKDIKEPL NVSVMGCVVN
AIGEAKGADV AIAFGKGNGM IMRHGEVVAR LPESELVDRF LQEIDDEIKS RG
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