Gene CCC13826_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0663 
Symbol 
ID5596100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp752200 
End bp752937 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content43% 
IMG OID640929318 
ProductSMR family multidrug efflux pump 
Protein accessionYP_001466614 
Protein GI157165396 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA ATATCTTAGA ACTTAAAAAA ATCAATAAAT TTTATGGAGA GCTTCACGCC 
TTAAAGGATA TAAGCTTAGA GGTAAAAAGT GGCGAAGTGG TCGTGCTTCT TGGACCATCG
GGCTGTGGCA AGAGCACAAC TCTTAGGTGC ATAAACGGCC TTGAGAGCAT AGCAAGCGGC
GAGATCATAA TAGACGGCGA AGTGATAGAT GCTAAATTTA ATGAGTGGCA AAGGATCCGC
CAAAAGGTCG GCATGGTCTT TCAAAGCTAC GAGCTATTTG ACCATATGAA CGTCATAGAC
AACGTCCTTC TTGGACCTTT AAAGGTGCAA AAAAGAGATA GAGCTGAGGC CGAAAAGACG
GCTGATATGT GGCTAAGCAA GGTTGGGCTA CTTGATAAGA AATTTGCCTA TCCAAAGGAG
CTAAGCGGCG GTCAAAAGCA GCGCATAGCA ATCGTTAGAA GCCTTTGCTT AAACCCTGAG
ATCATGCTAT TTGACGAGGT TACGGCTGCG CTTGATCCAG AGATCGTTAG AGAAGTGCTT
GATGTGATAC TAAATTTAGC CAAAGACGGC ATGACGATGC TAATAGTCAC CCATGAGATG
AGCTTTGCAA GGGCGGTTGC AAATAAGATC ATATTTATGG ACGCTGGAGC GATCGTGGAG
ATCAGCGAGC CAGAGGAGTT TTTTACTAAT CCAAAGAGCG ATCGCGCAAA GAAATTTCTA
AATTTATTCT CATTTTAG
 
Protein sequence
MSENILELKK INKFYGELHA LKDISLEVKS GEVVVLLGPS GCGKSTTLRC INGLESIASG 
EIIIDGEVID AKFNEWQRIR QKVGMVFQSY ELFDHMNVID NVLLGPLKVQ KRDRAEAEKT
ADMWLSKVGL LDKKFAYPKE LSGGQKQRIA IVRSLCLNPE IMLFDEVTAA LDPEIVREVL
DVILNLAKDG MTMLIVTHEM SFARAVANKI IFMDAGAIVE ISEPEEFFTN PKSDRAKKFL
NLFSF