Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0663 |
Symbol | |
ID | 5596100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 752200 |
End bp | 752937 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640929318 |
Product | SMR family multidrug efflux pump |
Protein accession | YP_001466614 |
Protein GI | 157165396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAA ATATCTTAGA ACTTAAAAAA ATCAATAAAT TTTATGGAGA GCTTCACGCC TTAAAGGATA TAAGCTTAGA GGTAAAAAGT GGCGAAGTGG TCGTGCTTCT TGGACCATCG GGCTGTGGCA AGAGCACAAC TCTTAGGTGC ATAAACGGCC TTGAGAGCAT AGCAAGCGGC GAGATCATAA TAGACGGCGA AGTGATAGAT GCTAAATTTA ATGAGTGGCA AAGGATCCGC CAAAAGGTCG GCATGGTCTT TCAAAGCTAC GAGCTATTTG ACCATATGAA CGTCATAGAC AACGTCCTTC TTGGACCTTT AAAGGTGCAA AAAAGAGATA GAGCTGAGGC CGAAAAGACG GCTGATATGT GGCTAAGCAA GGTTGGGCTA CTTGATAAGA AATTTGCCTA TCCAAAGGAG CTAAGCGGCG GTCAAAAGCA GCGCATAGCA ATCGTTAGAA GCCTTTGCTT AAACCCTGAG ATCATGCTAT TTGACGAGGT TACGGCTGCG CTTGATCCAG AGATCGTTAG AGAAGTGCTT GATGTGATAC TAAATTTAGC CAAAGACGGC ATGACGATGC TAATAGTCAC CCATGAGATG AGCTTTGCAA GGGCGGTTGC AAATAAGATC ATATTTATGG ACGCTGGAGC GATCGTGGAG ATCAGCGAGC CAGAGGAGTT TTTTACTAAT CCAAAGAGCG ATCGCGCAAA GAAATTTCTA AATTTATTCT CATTTTAG
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Protein sequence | MSENILELKK INKFYGELHA LKDISLEVKS GEVVVLLGPS GCGKSTTLRC INGLESIASG EIIIDGEVID AKFNEWQRIR QKVGMVFQSY ELFDHMNVID NVLLGPLKVQ KRDRAEAEKT ADMWLSKVGL LDKKFAYPKE LSGGQKQRIA IVRSLCLNPE IMLFDEVTAA LDPEIVREVL DVILNLAKDG MTMLIVTHEM SFARAVANKI IFMDAGAIVE ISEPEEFFTN PKSDRAKKFL NLFSF
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