Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0645 |
Symbol | dcuC |
ID | 5595894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 764286 |
End bp | 765605 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640929334 |
Product | DcuC protein |
Protein accession | YP_001466630 |
Protein GI | 157165415 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTTT CTATGAAAAA ACTGGTCGTC CCTATATTTT TAGATATGTT TTTACACTTT ATAACACTCA TCATAAACAC CTACATGGTG ACAAAAGTGA GCGTGCATCT AGTTGGCGCC ATGGGTGCTG GCAATCAAGT GATGGATCTT TTTATGACCA TTTTTAACTT TTTAAGCATG GGCTGCTCAG TCGTCGTCGC ACAAGCCCTT GGAGCAAAGC AAAACGAGCT AGCCTCAAAC GTCATACACG CAAGCATCAC GTCAAATACG GTCTTTGGTA TCTTCTCAGC CATCATCATC TACGTCTTTG GCTACAACAT CTTAAATTTA CTAAATGTGC CAAATGATCT CATAAACGAT AGTTTCTCAT ACCTTCACAT CCTTGGCTTT GCATTGCTAT TTGATGGCAT CGGCATGGTG CTAGCTGCGG TGCTTCGCGT CTATAACCTA GCAACCGCAG TCATGCTAAC TTCAGTTTTA ATGAACATCA TCACCATCTT TGGCAACGCC ATCGCTCTTT TTGGCTGGTT TGATCTACCA AATTTAGGCT TGCAAGGTGT TGCTATCTCG ACATTTGTAG GTAGGCTTAT TGGCGTTTTT GTCCTACTTT ACATGCTCAT ACGCGTGGCA AAAGTTAGAA TTTATCTTAG CAAACTGCTC GTCGTGCCGT TTGGAATTTT AAAGAAAATA CTCTCAGTTG GCTTGCCAAG TGCTGGCGAA AATTTACTCT GGATGGCGCA ATACATGGTC GCATTTGGCT TTATCGCGAG CATGGGCGAG GCAACTCTTA GCGTGCAGAC TATCTACTTT CAGATCACTC TTCTCATCTT GCTTTGCGGC GCAAGTATCA GCGTGGCAAA CGAGGTCATC GTGGGGCATT TGGTTGGAGC AAGCGAGTTT AACGAGGCTT ACACAAGAAC CTTTAAAGCC TTGTGGCTTG GCATTTCTAT AACGCTCGTC GTCGTTTTGA TCGCCTACGC CTTAAAGTAT AAGATCATGG ACGCACTAAA TTTAGATGAG GGCTTACGCA AGATAATGCT ACCGCTCTTT ACGCTCTCGA TCGTGCTAGA AGCTGGCAGA ACCTTTAACA TCGTCATCGT AAATGCCCTT CGTGCAAGTG GCGACGCGAA ATTTCCACTA GCGACTGGGC TTATCTTTAT GTGGGGGCTC TCGCTGCCGC TTGGATATTT CTTAGGCATA CACCTTGGCT GGGGCATCGT TGGCGTTTGG ATAGGATTTT GCGCTGATGA GTGGCTAAGA GGCCTTGCAA ATACCTGGCG CTGGAGAAGC AAAAAATGGC AAGAAAAACG CCTAGTTTGA
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Protein sequence | MNLSMKKLVV PIFLDMFLHF ITLIINTYMV TKVSVHLVGA MGAGNQVMDL FMTIFNFLSM GCSVVVAQAL GAKQNELASN VIHASITSNT VFGIFSAIII YVFGYNILNL LNVPNDLIND SFSYLHILGF ALLFDGIGMV LAAVLRVYNL ATAVMLTSVL MNIITIFGNA IALFGWFDLP NLGLQGVAIS TFVGRLIGVF VLLYMLIRVA KVRIYLSKLL VVPFGILKKI LSVGLPSAGE NLLWMAQYMV AFGFIASMGE ATLSVQTIYF QITLLILLCG ASISVANEVI VGHLVGASEF NEAYTRTFKA LWLGISITLV VVLIAYALKY KIMDALNLDE GLRKIMLPLF TLSIVLEAGR TFNIVIVNAL RASGDAKFPL ATGLIFMWGL SLPLGYFLGI HLGWGIVGVW IGFCADEWLR GLANTWRWRS KKWQEKRLV
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