Gene CCC13826_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0605 
Symbolrho 
ID5596918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1171184 
End bp1172527 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content46% 
IMG OID640929726 
Producttranscription termination factor Rho 
Protein accessionYP_001467008 
Protein GI157165083 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000783157 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA ACAACCAAAC CGAGCAAAGT GCTGCTCAAA ACACAAAAAC TACAAAAAAA 
CATCAAGCAT CAAGAACCCA CGTACCAGTC GACGGACACA AGATCGAAGA GCTAAGAACA
CTTAGCTTAG ATGAGCTAGT GCAGATCGCA AATGGCGTTG GCGTCGAAAA TCCACGCGAA
TTTCGCAGGC AGGATTTGAT ATTTGAGATA CTAAAAACCC AGACAAAACA AGGTGGCTTT
ATACTATTTA CTGGAATTTT AGAGATCACA AACGAGGGCT ACGGCTTTTT AAGGGCTGTT
GATGCAAATT TAAGCGACAG CTCAAACGAC GCTTATGTTT CAAACTCTCA GATCCGCAAA
TTTGCACTTC GTGTGGGCGA CATCATCACC GGCCAAGTAA GAGAGCCAAA AGATCAGGAA
AAATACTACG CTCTTTTAAA GATCGAAGCG GTAAACTACA TGCCTCTAGC AGATGCAAAA
GAGAGGCCAC TCTTTGACAA CTTAACCCCA CTTTTCCCAA CCGAAAAGCT AAATTTAGAG
TATGATCCGA TGAAGCTAAC GGGCCGTGTG CTTGATCTTT TCACGCCTAT TGGCAAGGGT
CAGCGTGGCC TCATCGTCGC ACCTCCAAGA AGCGGTAAAA CTGAGCTTAT GAAAGAGCTA
GCTCACGGCA TCGCTAAAAA TCACCCAGAA GCCCAGCTAA TGGTGCTTCT AGTCGATGAA
AGACCAGAAG AAGTTACAGA CATGCAGCGC TGCGTAAAAG GCGAGGTATT TAGCTCGACA
TTTGACCTGC CAGCGCTTAA CCACGTCCGC GTGGCAGAGC TTGTCATCGA AAAGGCAAAA
CGTCTAGTTG AGATGGGCAA AGACGTCATC ATTTTGCTTG ATAGCATAAC CCGTCTAGCA
CGCGCCTATA ACACAGTGAC CCCGCCAAGC GGCAAGGTGC TAACAGGCGG CGTGGACGCA
AACGCACTTC ACAAGCCAAA ACGATTCTTT GGCGCAGCTA GAAACATCGA GCACGGCGGC
TCACTAACCA TCATCGCAAC CGCGCTAATC GACACTGGCT CACGTATGGA TGAAGTGATA
TTTGAAGAGT TTAAGGGCAC TGGAAACAGC GAGATCGTGC TTGACCGCAA CATCTCAGAC
CGCAGAATTT ACCCAGCTAT CAACGTGCTA AAATCAGGCA CAAGAAAAGA AGAGCTACTT
CAAAAACCTG ATGAGCTTCA AAAAATTTGG GCTATCCGCT CTGCGATCGC GACAATGGAC
GACGTCGAAG CACTTAAATT CTTATACGCA AAAATGCTAA AAACAAAAGA TAATAAAGAG
CTTCTCTCTA TCCTAAACGA GTAA
 
Protein sequence
MENNNQTEQS AAQNTKTTKK HQASRTHVPV DGHKIEELRT LSLDELVQIA NGVGVENPRE 
FRRQDLIFEI LKTQTKQGGF ILFTGILEIT NEGYGFLRAV DANLSDSSND AYVSNSQIRK
FALRVGDIIT GQVREPKDQE KYYALLKIEA VNYMPLADAK ERPLFDNLTP LFPTEKLNLE
YDPMKLTGRV LDLFTPIGKG QRGLIVAPPR SGKTELMKEL AHGIAKNHPE AQLMVLLVDE
RPEEVTDMQR CVKGEVFSST FDLPALNHVR VAELVIEKAK RLVEMGKDVI ILLDSITRLA
RAYNTVTPPS GKVLTGGVDA NALHKPKRFF GAARNIEHGG SLTIIATALI DTGSRMDEVI
FEEFKGTGNS EIVLDRNISD RRIYPAINVL KSGTRKEELL QKPDELQKIW AIRSAIATMD
DVEALKFLYA KMLKTKDNKE LLSILNE