| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0578 |
|---|
| Symbol | gmhA |
|---|
| ID | 5595948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1190705 |
|---|
| End bp | 1191274 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640929751 |
|---|
| Product | phosphoheptose isomerase |
|---|
| Protein accession | YP_001467033 |
|---|
| Protein GI | 157164297 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0279] Phosphoheptose isomerase |
|---|
| TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.711121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA CGATGATAAA AAATGAGCTC GAGGCTCACC AAAAGACCTT TAGCGAGCAT
GTAAATTTGC TAGGTAGCTT GGAGCTGGCT TGCCAGATGG TGGCTGATAC GCTAAAAAAT
GGCAAAAAGG TGCTGATATG CGGTAACGGC GGCTCTGCAG CGGACGCTCA GCACTTTGCA
GCCGAGCTAA CTGGCAGATA TAAAAGCGAG CGTCAGCCAC TTCCAGGCAT TGCGCTAACC
ACCGACACTT CGGCACTTAC AGCCATTGGC AACGACTACG GCTTTGACTA CGTTTTCTCA
CGCCAGTTTG AGGCTTTAGC CCAGTCTGGC GACTTACTCG TGGCGATCTC AACGAGTGGC
AACAGCAAAA ACGTCCTTGA AGCTATAAAA AGTGCCAAGA AAATGGGTGT ATCGGTGCTC
GGACTTAGTG GTAAAGGCGG TGGCGCGATG AATGAAGGAT GTGATCTAAA TTTAGTCGTT
GGCTCAAGCG ATACAGCAAG AATTCAAGAG TCGCATATCT TTTTTATACA CACGATCTGC
CAGGCCGTAG ATGAGGCTTT TAGGGGCTAA
|
|---|
| Protein sequence | MLKTMIKNEL EAHQKTFSEH VNLLGSLELA CQMVADTLKN GKKVLICGNG GSAADAQHFA
AELTGRYKSE RQPLPGIALT TDTSALTAIG NDYGFDYVFS RQFEALAQSG DLLVAISTSG
NSKNVLEAIK SAKKMGVSVL GLSGKGGGAM NEGCDLNLVV GSSDTARIQE SHIFFIHTIC
QAVDEAFRG
|
|---|
| |