| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0547 |
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| Symbol | fliR |
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| ID | 5596398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1558362 |
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| End bp | 1559123 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640930104 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001467383 |
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| Protein GI | 157165085 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00458922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTAG TAGAATTTTT TGGAGCCGAT AAGACAATAG TTTTTATGCT TTTGTTTGCA
CGCCTAAGCG GTCTCATCGT CTTTTTTCCA TTTTATTCGC ACAATCAAAT TCCACTTAGC
GTAAAAACGC TTTTAGTTTT TGTTCTTTGC GTCGTGCTTT TTCCTCTCTC AAAAGCTCAT
GAAAACTCTA TAAATTTCCT AGTCGGTGAG ATACTTGGCG AGGTGATGCT GGGTCTTAGT
GCAGGACTTA TGCTAACCAT CATCTTTGCC ACGCTTCAAA TGGCAGGTGA GCAAATTTCA
ATGGTCATGG GCTTTTCGAT GGCCTCTGTG CTTGATCCGC AAACTGGCAC AAACTCTCCA
GTCATAGCAA ACCTTATAAA TTTCATAGCA CTGCTAACAT TTTTGGCATT TGATGGTCAC
CATTTACTCC TTCAGTTTTA CGCTAGCTCT CTTGCTGTGG TGCCTCTTGG TGACTTTTAT
CCGCGCCCTG GCATAATGAG CTATGCGATA AATTTATTTA CAAATTTGTT TATGTTTGGC
TTTATCATGT CATTTCCTAT CATCGCGCTT TCTTTGCTCT CAGACTCCAT TTTTGGCATG
CTCATGAAGA CAATGCCGCA GTTTAACCTA CTAGTCATCG GCTATCCTAT CAAAGTGACG
ATCGGATTTT CTGTTTTGAT AGCCATTTTA GCAGGCATTA TGAAGATAAT GAGCGACCTA
CTTTTAAAAG TGATAAATGA TCTGCCAGCT CTGTTTTTTT AA
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| Protein sequence | MELVEFFGAD KTIVFMLLFA RLSGLIVFFP FYSHNQIPLS VKTLLVFVLC VVLFPLSKAH
ENSINFLVGE ILGEVMLGLS AGLMLTIIFA TLQMAGEQIS MVMGFSMASV LDPQTGTNSP
VIANLINFIA LLTFLAFDGH HLLLQFYASS LAVVPLGDFY PRPGIMSYAI NLFTNLFMFG
FIMSFPIIAL SLLSDSIFGM LMKTMPQFNL LVIGYPIKVT IGFSVLIAIL AGIMKIMSDL
LLKVINDLPA LFF
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