| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0540 |
|---|
| Symbol | |
|---|
| ID | 5595684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1551606 |
|---|
| End bp | 1552694 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640930097 |
|---|
| Product | thioesterase family protein |
|---|
| Protein accession | YP_001467376 |
|---|
| Protein GI | 157164115 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAG ATTTTGCAAA TTTAACATAT CAACATGAAC TTTATAAAGA TGAAATAGAA
AAAGCTATTT TAAAGGTAGC TAGAAATTGT AACTTTATAA TGGGCACTGA AGTTTCTGAG
CTTGAAACAG AACTAGAAAA ATATATAGAT GTTAAGTATG CCATAAGCTG CAGTAGTGGA
ACTGACGCCA TTTTGATGGC TCTAATGGCT ATTGATATTA AGCCAGGTGA TGAAGTTATT
ACAACACCTT TTACTTTTGT AGCAACATCT GAAATGATTG CTTTGCTTGG AGCAAAACCA
GTTTTTGTTG ATATCGATGA AAAAACTTAT AATATAGATG CTAATAAAAT AGAAGCAGTC
ATAACTTCAA AAACAAAAGC CATACTTCCA GTTTCACTTT ATGGTCAGCC TGCTGATATG
GACGAAATTT CAAAAATAGC CAAAAAACAT AACCTAAAGG TTATAGTTGA TGGTGCGCAG
AGTTTTGGCG CAAGCTTTAA TAATGTCAAA GATTTGGCTC TTGGCGATAT TGCTACTACA
TCATTTTTTC CAGCTAAACC ACTTGGCTGT TATGGTGACG GTGGTGCTGT TTTTACAAAT
GATGAAAATT TGGCGGTAAA GTTAAAATCT TTACGCTTAC ACGGGCAGTC AAAAAGATAT
CATCATCAAT ATATTGGTAT TGGTGGTAGA TTAGATACTA TTCAAGCAGC TGTCTTGTTG
GTAAAACTTG GACATTACAA AAAAGATTTA TCATTAAGAC AAGAAGTGGC ATCTAAATAC
ACAGATGCAT TGCAAGATAA AAATGTAATA TTGCCATACA TTGATAGTAG AGCTCAGTCA
GCTTGGGCAC AGTATTCTAT TAGAATAAAA AATAGAGATA AAGTGCAGCT AAAATTAAAA
GAAGCCGGTG TGCCAACAGC TGTACATTAT CCTATGCCAC TTCATTTACA AGAGTGTTTT
AAATATTTAG GATATAAGTC CGGAGACTTC CCTATAGCGG AAATGATTTC AAATGAGATA
ATGAGCTTAC CTATGAATCC ATATTTAAAA GATGTGGAAA TTGAATTTAT TGTAGAAAAT
TTAAAATAA
|
|---|
| Protein sequence | MNIDFANLTY QHELYKDEIE KAILKVARNC NFIMGTEVSE LETELEKYID VKYAISCSSG
TDAILMALMA IDIKPGDEVI TTPFTFVATS EMIALLGAKP VFVDIDEKTY NIDANKIEAV
ITSKTKAILP VSLYGQPADM DEISKIAKKH NLKVIVDGAQ SFGASFNNVK DLALGDIATT
SFFPAKPLGC YGDGGAVFTN DENLAVKLKS LRLHGQSKRY HHQYIGIGGR LDTIQAAVLL
VKLGHYKKDL SLRQEVASKY TDALQDKNVI LPYIDSRAQS AWAQYSIRIK NRDKVQLKLK
EAGVPTAVHY PMPLHLQECF KYLGYKSGDF PIAEMISNEI MSLPMNPYLK DVEIEFIVEN
LK
|
|---|
| |