| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0509 |
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| Symbol | |
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| ID | 5596910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1518846 |
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| End bp | 1519817 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640930069 |
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| Product | P-protein |
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| Protein accession | YP_001467348 |
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| Protein GI | 157164896 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTAAAT TTAATGTTTT AAATAGCTCA AGACTCGACG TTGTAGTGGC CAAAGAGCTT
CAAATTTCAC GTAATCAAGC TTTAAATTTA ATAAAAGACT CCCTTGTAAG CGTAAATTTA
AAACCAGTCT CAAAACCAAG CTTTTTACTG AGCGAAAACG ATGAAATTTG CGTAAATTTT
GCCCCAAAAA AAGAGGTACA AAACGAATAC GAAGTAAATT TCGATATCCC GATTATATAT
GAAGACGACG ATCTCATAGT GCTAAACAAA CCCCCGCAAA TCGTCGTTCA CCAAGCCCCA
AGCGTCAAAG AGGCGACACT TGTTGAGTGG CTAAATAAAA AGGGCTTTAT GCTCTCAAAT
TTAAACGGCG ACGTAAGAGC TGGCATCGTC CATCGCCTAG ATAAGGGCAC GAGCGGCGCT
ATCGTCGTTG CTAAAAATAA CTTCGCCCAC GCAAAACTAA GCGAGCAGCT AAGCGATAAG
AGCATGGGAC GAATTTATCT AGCGCTCACT GATCTTCCCC TAAAAGAGGA CATCATCATC
GATAAGCCAA TCGGCAGAAA TCCAAACAAC CGCCTAAAAA AAGCGATCGT CGCAGACGCT
AAATTTGCCA AAAGTGCCTT TGTAAATTTG CTAAGTGAAG GCGGAGTAAA TTTGATAGCA
GCAAAGCTTT TTACAGGCAG GACACATCAG ATAAGAGTGC ATCTTGCTAG CATAAATCGC
CACATTTTAG GCGATGATTT ATACGGATTT AAGAGCCAAG GCGATAAAAT AAGCAGGGTT
ATGCTTCACG CTTATATGCT CTATTTTATC CATCCGCGAA CTGGCAAAAG GGTAGAATTT
ACCGCAAAAA CGTATGATGA CTTTAACCAA ATAATTTACA AAAAAATTCC CAAGGAGATT
TTTGATGAAA AAATTTGCCC TACGCATATT GACACCATTT TTAGTAGCTT TCTTAGCGGG
ATGCGGCTCT AG
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| Protein sequence | MVKFNVLNSS RLDVVVAKEL QISRNQALNL IKDSLVSVNL KPVSKPSFLL SENDEICVNF
APKKEVQNEY EVNFDIPIIY EDDDLIVLNK PPQIVVHQAP SVKEATLVEW LNKKGFMLSN
LNGDVRAGIV HRLDKGTSGA IVVAKNNFAH AKLSEQLSDK SMGRIYLALT DLPLKEDIII
DKPIGRNPNN RLKKAIVADA KFAKSAFVNL LSEGGVNLIA AKLFTGRTHQ IRVHLASINR
HILGDDLYGF KSQGDKISRV MLHAYMLYFI HPRTGKRVEF TAKTYDDFNQ IIYKKIPKEI
FDEKICPTHI DTIFSSFLSG MRL
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