| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0479 |
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| Symbol | rfaF |
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| ID | 5597419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1486354 |
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| End bp | 1487307 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640930041 |
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| Product | lipopolysaccharide heptosyltransferase II |
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| Protein accession | YP_001467320 |
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| Protein GI | 157163923 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTTT TTATCGAGCT TCCAACCTGG CTAGGTGATA GCGTGATGGC AAGCGCTGCG
ATAGAAAATT TGGTGCAAAA TGAGAAGAAT TTACAAATCG TTTTTTTTGG CTCATTTATA
GCCTGCGAGC TTTATAAAAG CCATCCAAAC TGCGAAAAAG TTGTCGTTGA TGAGAGTAAA
AAAGCTAAAT TTAGGTTTTT ATCTCTTGCA AAAAGCGCAA AAAGTCTTGG CAAATTTGAT
CTAGCTCTTA GCTTTAGAAG CTCGTTTGCT AGTAAATTTT TGATATTTTT TATAAACGCT
AAGAAAAAAG CCATCTTTAA AAAGAGTAAA ACCGTCCTTC ATCAGGTGCT AAAATATGCA
AATTTTGTAA AAAATGCCCT TGGCTTGGGC GAAATTTCTA CTCAGTTAAA GCTACATTTT
ACACCTCAAA TTTCAGCTAA AAAAACACTG GCTCTAAATC CAGGTGCGAG CTACGGAAGT
GCAAAAAGAT GGTATCCAGA GTATTTTGCA CAGGTGGCTT TAAATTTCAA AAATGAGTTT
GAGATCGTAA TCTTTGGTGG CAAAGGCGAG CAAGAAATTT GTGAAAAAAT TGAGCAAATT
TTAAAAGAAA ACGGCGCAAC TTGCCAAAAT TTAGTTGGCA AAACAAGCGT CAAAGAGCTT
TGTGGGCGCA TAGCTGGGCT TAGACAAAAT GGCATTTTCG TCACAAACGA TAGCGGTCCT
ATGCACGTAG CTGCCGCCTT TCATGTGCCA ACAATCGCTC TTTTTGGACC GACAAAATTT
AGCGAAACCT CGCCATGGGG AAATGAATTT GCAAAGATAG TGCATCTAAA TTTAGCTTGC
ATGCCCTGTA TGAAGCGAGT TTGCCCACTA AAAACGCATG CTTGCATGAG AGAGCTAAAG
TCCCAAATGG TGATAGATGA GATAAATTTA CTAAGAAAAG AGAGTGGGAT TTAG
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| Protein sequence | MRVFIELPTW LGDSVMASAA IENLVQNEKN LQIVFFGSFI ACELYKSHPN CEKVVVDESK
KAKFRFLSLA KSAKSLGKFD LALSFRSSFA SKFLIFFINA KKKAIFKKSK TVLHQVLKYA
NFVKNALGLG EISTQLKLHF TPQISAKKTL ALNPGASYGS AKRWYPEYFA QVALNFKNEF
EIVIFGGKGE QEICEKIEQI LKENGATCQN LVGKTSVKEL CGRIAGLRQN GIFVTNDSGP
MHVAAAFHVP TIALFGPTKF SETSPWGNEF AKIVHLNLAC MPCMKRVCPL KTHACMRELK
SQMVIDEINL LRKESGI
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