| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0473 |
|---|
| Symbol | |
|---|
| ID | 5595583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1480376 |
|---|
| End bp | 1481446 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640930035 |
|---|
| Product | putative lipopolysaccharide heptosyltransferase III |
|---|
| Protein accession | YP_001467314 |
|---|
| Protein GI | 157164774 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02201] lipopolysaccharide heptosyltransferase III, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.189899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TTGTGATTAA ATTTAGAAAC ATCGGCGACG TGCTTTTGAC AACGCCGCTC
ATTGAAAATT TGCACCACTA CTACCCAGAT GCGACCATCG ACTTCGCCCT AAATAAAGGC
ACAGAAGCGA TGATAGAAGG CAATCCTTAT ATAAATAAAA TCCACATTTA CGATAGGCAA
AGTGCAAATT CTGGCTTTTT TAAAAAGCTA ATTACCGAGC TAAAATTTAT AAGAGCGATC
AAAAAAGAGA AGTACGATAT GGCGGTGCAA ACGACCACTG GAGACCGCGG AGTCATCATC
TCAAAATACG CCAAGATCAA AAAGATAGTT GGCTTTTTAG GCAAGCACAA TGCGATAAAC
AAACTTTTAA GCGTAAAGGC AAAATACTAC GAAAATTTCT CTCATACGGT TGATCTAAAT
TTAAACGCGC TAAGGGCTTT GGGCTTTGAG CCAGTGAGCA AAAAAGTGAG CGTTTTTTCA
GACGAGAGCA TGGAGCATCT AAATTTACCA AAACGCTTTG TACACGTGCA TCTAACAAGC
CGCTGGATGT TTAAATGCGC AAACGACGAG AGTATGGCAG AGCTCATCGA CTACTGCGAA
AACGAGCTAA ATGTAAAGGT CGTGCTAACA AGCGACAACA AAGAAAATGA GCTAAATAAG
CTTGCAAATG TGCTAAAAAT TTGCAAAAGC GAGCCTATAA ATTTAGGTGG CAAGCTAAGC
CTAAAACAAA CGATCGCCCT CTCAAAGCGC TCAAGTCTCT TTATCGGCGT CGATACTGCG
ATCATGCATA TAGCCGCTGC AAATGACGTG CCAGTGATCG CCTTTTTTGG CCCAAGTAAT
GCTTACGAGT GGGGACCATG GGATAATAAC TTAATGCGAA ATGGCTACAC AGCGCAAAAT
GGCATCCAAA GCATGGGTAA GCACATCGTC TATCAAAAGA ACTGGGACTT TGTGCCATGT
GATAAAGAGG GTATAAAAGA GAACGGCATC GAAAAGACTT TAATGGACTT TAGCGATGAA
ATGGGACAGA TAAAGGCGAA AATAAGATCA AATTTGGAGC TAGCGCAATG A
|
|---|
| Protein sequence | MKILVIKFRN IGDVLLTTPL IENLHHYYPD ATIDFALNKG TEAMIEGNPY INKIHIYDRQ
SANSGFFKKL ITELKFIRAI KKEKYDMAVQ TTTGDRGVII SKYAKIKKIV GFLGKHNAIN
KLLSVKAKYY ENFSHTVDLN LNALRALGFE PVSKKVSVFS DESMEHLNLP KRFVHVHLTS
RWMFKCANDE SMAELIDYCE NELNVKVVLT SDNKENELNK LANVLKICKS EPINLGGKLS
LKQTIALSKR SSLFIGVDTA IMHIAAANDV PVIAFFGPSN AYEWGPWDNN LMRNGYTAQN
GIQSMGKHIV YQKNWDFVPC DKEGIKENGI EKTLMDFSDE MGQIKAKIRS NLELAQ
|
|---|
| |