Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0469 |
Symbol | |
ID | 5596704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1476747 |
End bp | 1477757 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640930031 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_001467310 |
Protein GI | 157164466 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000368758 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAA GTTACATCTG CGTCTTTGAC TGCGAGACGA TACCTGATGC AAATTTGATA AGAAAAATTT ACGGCATCGA CGGAAGCGAC GAAGATGTGA GCGTGCAGGC GATGGCCTTG CAAAAAGAGG CCAGTGGGAG TGAGTTTTTG CCTGTGATGT TTCATAGAGT TGTGGCGATC TCTGCGGTGA TGGCCGATGA ATACGGCAAA TTTTTAAAAG TTAGCACGAT GGAGGGCAAG GATGAGCGCG AGATCATCGC TAAATTTTTA AAATTTATAA ATGATTACAA CCCAAGGCTT GTTAGCTTTA ACGGCCGTGG TTTTGACCTG CCAATGCTTA TGGTGCGTGC GATGCGCTAC AACCTAAACG CAGCGGCATA TTATGAGAGC GAAAACAAAG AGCTAAACAA AAACAAATGG GAAAATTATA GAGCAAGGTA TTCGCCTAAA TTTCACCTTG ATCTGCTTGA TTTTATAAGC GATTTTGGAA GTGTGAGAGG GCTAAAGCTC GATACGCTTT GCGCTAGCTT AAATTTACCT GGCAAATACG ACGTGCACGG CGATCAGGTG CTTGAGCTAT ACTACGCAGG CGAGCTTGAT AAGATAAATG AATACTGCGA AAGCGACGTG CTTAATACCT ACTGGCTCTT TTTGAAATTT GAGCTTTTGC AGGCAAATAT CTTGCAAGAT GACTACATAA ATCACCTAAG CGTAATGAGT GAATTTCTAG CCAAAAACTG CGCTCACAGG GGATACACTG AGGTCTTTTG CTCTGCGATA AGCGACGAGC TAGAAAGAAT TTCTGGCAAG CTAGACTACG AGATAAAGGT AGATAAAGAG GCTTTAGAAT TTAGTGAATT TGATGATGCA AGGCCCATTA GCAAAGAGGA GCTAAACCGC GATATGCTGG GCGGTCTGCT TAAAAAAGCA AGCGATCTAA AGCCAAAAGA GCCAAAAAAC AAGACACTTT TTGAAGAGAA AGTGCCTGAG ATAAATTTAG ACGACGAATA A
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Protein sequence | MAKSYICVFD CETIPDANLI RKIYGIDGSD EDVSVQAMAL QKEASGSEFL PVMFHRVVAI SAVMADEYGK FLKVSTMEGK DEREIIAKFL KFINDYNPRL VSFNGRGFDL PMLMVRAMRY NLNAAAYYES ENKELNKNKW ENYRARYSPK FHLDLLDFIS DFGSVRGLKL DTLCASLNLP GKYDVHGDQV LELYYAGELD KINEYCESDV LNTYWLFLKF ELLQANILQD DYINHLSVMS EFLAKNCAHR GYTEVFCSAI SDELERISGK LDYEIKVDKE ALEFSEFDDA RPISKEELNR DMLGGLLKKA SDLKPKEPKN KTLFEEKVPE INLDDE
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