| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0466 |
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| Symbol | |
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| ID | 5596340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1473204 |
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| End bp | 1474244 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930027 |
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| Product | putative soluble lytic murein transglycosylase |
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| Protein accession | YP_001467306 |
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| Protein GI | 157164327 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.356874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTCT CAATATTAAA TTTACTGCCT ATCAAACAAG GCAGTGATGC AAAAGCTGCC
ATAGATGCAG CCGTTAGACT AGCTATTTTT GCCGAGGATA TCGGTATGAA ACGCTACTGG
GTTGCCGAGC ATCATAATAT GAAAAATTTA GCAAGCTCAG CCACACAGCT CATCATCGCG
CACATCTTAG AGCATACAAC AAGCCTGCGC GTGGGCTCTG GCGGCGTGAT GCTGCCAAAC
CACAGCCCCT ATTCTATCGC CGAGCAGTAT GCCACTCTTG AGACGATATT TGCAAACCGA
GTCGATCTTG GGCTAGGCAG AGCTCCAGGG ACTGACCAAA AAACAGCTGC GGTGCTTAGA
CGAGGTGCTA GAGAGATAGA ATTTGACCTG CAGATAAACG AGCTAATGGA CTATTTTAAC
GCCAAAAGAG CCGTGAAAGC CTATCCAAAA ATTGAAAAAT TTCCGCCCAT CTACATACTT
GGCTCAAGCA TATATAGCGC ATACGTGGCG GCTGAGTTTG GTCTGCCTTA CGCCTTTGCG
TCGCACTTTG CACCACGTGC GCTAGAAAAA GCAGTAGAAA TTTATCGTCA AAGTTTCAAG
CCATCCCAGT TTCTTGCCGC TCCTTATGTC ATCGCAGGAG CAAACGTGAT AATAGCCCAA
AGTGACGAGC TAGCAAAGAG TTTGGCAACT ACGCAAACGC AGTTTTTCTT AAACGTAGTA
ACTGGCGAAA AAGAGTATTT GCAGCCACCA AAAAAGGATA ACGACGAGGT CTTTGCTGCA
TCTTGCAAAA CAGGCGCCAA AGCTCCACAC TTTGGGCCGA TCGACTTTAG GCAAATAGAG
CTAAAAAATA GAGAGAGAAT CGTCACAGAA GAGATGATGG CGTGCTCTTT CATAGGCTCA
AAGCAAAGCG TTAAAGAGCA AATTTTAGAG TTTCAAAACA GACTTGAAGT CGATGAGATC
ATGGCTCAAA GTTTCATTTT TGATGAGGAG GCACAGTTTA GCTCTTTTAG GGCGTTAAAA
GAGATCGCGG ACGAAATTTA A
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| Protein sequence | MEVSILNLLP IKQGSDAKAA IDAAVRLAIF AEDIGMKRYW VAEHHNMKNL ASSATQLIIA
HILEHTTSLR VGSGGVMLPN HSPYSIAEQY ATLETIFANR VDLGLGRAPG TDQKTAAVLR
RGAREIEFDL QINELMDYFN AKRAVKAYPK IEKFPPIYIL GSSIYSAYVA AEFGLPYAFA
SHFAPRALEK AVEIYRQSFK PSQFLAAPYV IAGANVIIAQ SDELAKSLAT TQTQFFLNVV
TGEKEYLQPP KKDNDEVFAA SCKTGAKAPH FGPIDFRQIE LKNRERIVTE EMMACSFIGS
KQSVKEQILE FQNRLEVDEI MAQSFIFDEE AQFSSFRALK EIADEI
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