| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0465 |
|---|
| Symbol | |
|---|
| ID | 5597571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1474241 |
|---|
| End bp | 1475068 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640930028 |
|---|
| Product | DNA ligase |
|---|
| Protein accession | YP_001467307 |
|---|
| Protein GI | 157165377 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1793] ATP-dependent DNA ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.51001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTGCTTT TAAATTTTAC TTTTGGCCTT GAACTATTAC GCCTTAGCGA ATTTAAAGAT
CAAAACGTCA GTGGCTGGCT AGCTAGCGAG AAGCTTGATG GTGTGCGTGC CTACTGGGAC
GGAGAAAATT TGCTTTCAAG GCAGGGCAAA AAGCTAAATG CACCGCTAAG TTTTACTAAA
AATTTCCCTA AATTTGCACT TGATGGCGAG CTTTACGTAA AGGGGCTTAA ATTTGAAGAA
ATTCAAGCGA CCGTGATGGA TAAGCTGCCA GATGAAAGGG CGTGGAGCAG GCTTAAATTT
CACGTTTTTG ACGTGCCAGA GGCAAGTGGC GGACTACTTA CCAGACTGGA AATTTTGGCT
AAATTTCTAA AAAATGAGCC AAATGACAAT TTAATCATCA TAAAGCAGAT AAAAATGCGC
GATAACGCTC AATTTTTAAA ATTTACAAAG GACATTATCG CAAAAGGCGG CGAGGGAGCA
GTCGTGCGTG AGCCAAATGC GCCCTACGAG CGAAGACGAA GCAAAAATGC ACTTAAATTT
AAGAAATTTA AAGATGCTGA GTGCGAGGTG GTCTCCATAA ACAAAGGCAG CGGCAAATAC
GCAAATCTTA CTGGCTCGCT CACSTGCAAG GCGCTTGGCG GCAAAGATGA CAAAGAAAAA
GCTGGCGAGC CAAAAGAGGG CACTATCTTT AAAATAGGCT CAGGACTAAG CGACGAGCAG
CGCACAAATC CCCCAAAGAT AGGCTCTATC ATCACATATA AATTTCAAAA TTTATCGTCT
TATGGCAAGC CAAGATTTCC TATATTTTTA AGAGTTAGAG AGGATTAA
|
|---|
| Protein sequence | MVLLNFTFGL ELLRLSEFKD QNVSGWLASE KLDGVRAYWD GENLLSRQGK KLNAPLSFTK
NFPKFALDGE LYVKGLKFEE IQATVMDKLP DERAWSRLKF HVFDVPEASG GLLTRLEILA
KFLKNEPNDN LIIIKQIKMR DNAQFLKFTK DIIAKGGEGA VVREPNAPYE RRRSKNALKF
KKFKDAECEV VSINKGSGKY ANLTGSLTCK ALGGKDDKEK AGEPKEGTIF KIGSGLSDEQ
RTNPPKIGSI ITYKFQNLSS YGKPRFPIFL RVRED
|
|---|
| |