| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0441 |
|---|
| Symbol | |
|---|
| ID | 5596090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1447756 |
|---|
| End bp | 1449681 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640930004 |
|---|
| Product | putative cell division protease FtsH-like protein |
|---|
| Protein accession | YP_001467283 |
|---|
| Protein GI | 157163907 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.375713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC AAAATAATAA CCAAAACAAC GGCGATAATA ACGGGTTTTT CAACAAAAAC
CCCATCTTTA TCTTTGCTAT TTTTGCGATA GTTATAGTTC TAGCTTTTAG AAGCTTTAGT
GGTGACGGAC TAGGCGGTAC TTTTGGGCTT GGTAGCAACG CTCAAAGCAA GATGATAGCT
TATTCTGAAT TTAAGGATAT GCTAAAGAAT AAGCAATTAA ATGAAGTTGC GATATCTGAA
ACCACGATAA AAGGCGTTGG TAATGACAAA ACCATCTACC TCGCAAAGCG CATAAATGAT
CCAACGCTCA TTGGCATACT TGAGCAAAAC GGCATAACTT ACAGCGTTTA TAGCGAAAAT
AACTGGTTTG GAGATCTTAT ATTTTCATGG ATCATACCGG TGTTTATATT TTTTGCTATT
TGGATGTTTA TCGCTAGTCG TATGCAAAAA AATATCGGCG GTGGCATACT AGGCATAGGA
AGTGCAAAAA AGCTTATAAA TTCTGAAAAA CCAAAAGTTA AATTTGACGA TGTTGCAGGC
GTTGAAGAGG CAAAAGAAGA GGTTCAAGAG ATAGTTGATT ATCTAAAGAG CCCAGATAAA
TACCTAAGAC TTGGAGCTAA AATCCCAAAA GGTATTTTGC TTGTTGGCCC TCCAGGTACT
GGTAAAACGC TTCTTGCAAG AGCAGTTGCA GGTGAGGCTA GTGTGCCATT TTTTTCTATG
TCGGCATCAA GCTTTATAGA GATGTTTGTT GGCGTTGGTG CAAGTAGGGT TAGGGATCTT
TTTGAAAATG CAAAAAAAGA GGCCCCGGCG ATTGTATTTA TAGATGAGAT CGACGCGATC
GGTAAGAGTA GAAATTCTGG TCCTATGGGT GGCAATGACG AGAGAGAGCA GACGCTAAAT
CAGCTTCTTT CTGAGATGGA CGGCTTTGAT GCGGATAAGT CACCAGTCAT CGTTATAGCA
GCTACAAATA GACCTGAAGT TTTAGATGCT GCACTTTTAA GACCTGGTAG ATTTGACAGG
CAAGTGCTTG TTGATAAGCC TGATTTTAAG GGACGTTGCG ACATTTTAAA AGTTCATATG
AAAGATGTGA AAATCGGCAA AGATGTAAAT ATCGAGGATA TCGCAAGGCT TACTACTGGT
TTAGCAGGTG CTGATCTTGA AAATATCATA AATGAGGCGG CACTTCTTGC AGGACGTAAG
TCAAAGACTT TTGTCGAGCA GGCTGATCTA GTGGAGGCTG TTGAGAGATC GATAGCTGGT
TTAGAGAAAA AATCACGCCG TGTAAATCCA AAAGAGAAAA AGATAGTCAC TTACCATGAA
AGTGGCCATG CCTTGATAGC TGAGCTTACA AAAGGTGCAA AAAGAGTGAC AAAAGTCTCA
GTCGTACCGC GTGGTCTTGC AGCGCTTGGC TATACGCTAA ATACACCTGA AGAGAATAAA
TTTATGATGC AAAAGCATGA ACTACTTGCA GAAGTGGATG TGCTTTTGGC TGGTAGGGCT
GCTGAAGAGG TCTTTATAAA AGAGATATCA ACTGGAGCTA GCAATGATCT AGAGCGTGCA
ACTGATATCA TAAAAGCTAT GGTTAGCATG TATGGCATGA GCGATGTCGC TGGTCTTATG
GTGCTTGAAA AGCAGCGCGC AACATTTTTA AACGGCGGAC AAAGCATAAA AGACTATAGC
GACAAGATGG CTGAAAAAGT CGATGAGTTT GTAAAAGCGC TTCTTCATGA GAGATATACA
GCTGTGCTTG GTCTTCTTGA AATTTATAAA GGTGCTATTG AAAACATGGT CTCAGCACTT
TATGAAGAAG AGACAATCGA GGGAAAAAGA GTCAGAGAGA TCATCAAAAA CTACGAAGAA
GAAAATGGTC TTGAAAGCAG GCTTGTAGAG CTTGAAGAAG AGGAAAAAGG CAAAAAAGAG
GAATAA
|
|---|
| Protein sequence | MNNQNNNQNN GDNNGFFNKN PIFIFAIFAI VIVLAFRSFS GDGLGGTFGL GSNAQSKMIA
YSEFKDMLKN KQLNEVAISE TTIKGVGNDK TIYLAKRIND PTLIGILEQN GITYSVYSEN
NWFGDLIFSW IIPVFIFFAI WMFIASRMQK NIGGGILGIG SAKKLINSEK PKVKFDDVAG
VEEAKEEVQE IVDYLKSPDK YLRLGAKIPK GILLVGPPGT GKTLLARAVA GEASVPFFSM
SASSFIEMFV GVGASRVRDL FENAKKEAPA IVFIDEIDAI GKSRNSGPMG GNDEREQTLN
QLLSEMDGFD ADKSPVIVIA ATNRPEVLDA ALLRPGRFDR QVLVDKPDFK GRCDILKVHM
KDVKIGKDVN IEDIARLTTG LAGADLENII NEAALLAGRK SKTFVEQADL VEAVERSIAG
LEKKSRRVNP KEKKIVTYHE SGHALIAELT KGAKRVTKVS VVPRGLAALG YTLNTPEENK
FMMQKHELLA EVDVLLAGRA AEEVFIKEIS TGASNDLERA TDIIKAMVSM YGMSDVAGLM
VLEKQRATFL NGGQSIKDYS DKMAEKVDEF VKALLHERYT AVLGLLEIYK GAIENMVSAL
YEEETIEGKR VREIIKNYEE ENGLESRLVE LEEEEKGKKE E
|
|---|
| |