| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0416 |
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| Symbol | putP |
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| ID | 5597360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1421180 |
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| End bp | 1422667 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640929981 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001467260 |
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| Protein GI | 157165122 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.292846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTG GGTCTTATTT AGCCATCGCC ATCTATTTTG GTTTCTTGCT CTTCATCGGA
CGATATTTCT ACGATAAAAA TGCAAGTATG AACGAGTATC TGCTAGATAA CCGTCAAATG
GGTCCAGTCG TCACCGCACT TAGCGCTGGT GCTTCTGATA TGAGTGGTTG GATGCTACTT
GGCGTGCCCG GGGCTCTATA CGCAACTGGC GTGGCAAATG TCTGGATGAT AGCTGGTCTT
ATCGTGGGAG CATACTGCAA CTACTTATTT CTAGCAAAGA GGCTTAGGGT CTATACTGAG
GTTGCAAGCG ACAGTATCAC GATACCAGAC TTTTTAGAAA ACCGCTTTAA AGACAGAACA
AAAATTTTAA GGATCATCTC AGGTCTTATA ATCTTAATAT TTTTCACGCT TTACGTAAGT
AGTGGTATCA TCGCTGGTGG CAAAACTTTT GAGAGCTTTT TTGGCTTAAA ATTCGCATAC
GGAGCGGTCT TTACGCTCAT AATCGTAGTC TTTTACACAT TTTTTGGCGG ATTTAAGGCT
GTTAGCATAA CTGACGCATT TCAGGGTCTT TTGATGTTTT GTGTCCTAGT TTCGATCCCA
GTCGTGGCAT ATCTAAATTT AGACTTGCCA AGCGATACAA ATTTGATAAA AGAGATAAGC
AGGCTTGATG CAAACCACCT AAATCCATTT AGAGACCAGA CTTTCTGGGG TATTTTGGGC
CTTCTAGCTT GGGGCTTTGG CTACTTTGGG CAACCACATA TCATCGTTAG ATTTATGGCG
ATACGTGACT CAAAAGAGCT TGCAAAGGCA AGAAGGATCG GTATCGGCTG GATGACGATC
GGCCTACTTG GTGCAATTAT GAGCGGACTT ATCGGATTTG TCTATTTTAG CCAAAGAGGC
GGACTAAGCG ATCCTGAGAC AGTATTTTTA AAGCTTGGTG AGCTACTTTT CCCGCCATTT
TTTATAGGTA TCATCATCTC AGCCGTGCTT TCAGCGATCA TGAGTACCAT CTCAAGCCAG
CTTTTAGTCA CATCAAGCTC GGTCACAAAA GACTTCATAT TTGCCTTTTA TAAAAAAGAG
GTGAGTCAAA GCACACAAAC AGCGATCAGC CGCTATGCAG TCGTGGTCGT AGCGCTAATC
GCCACAGTAC TTGCCTTTAT CTCGACAGAT AACGTTCTAA ACGTCGTTGG CAACGCTTGG
GCTGGATTTG GCGCGAGCTT TGGTCCTGTG CTTCTTTTTA GCCTTTACTG GAAACGCATG
AGCGCACTTG GAGCGCTTGC TGGCATGATA GCTGGCGGTG CGACCGTAAT ATTTTGGATA
ACATCAGGAC TAAATGCCTA TGTTTATGAA ATTTTACCAG GCATTTTAAC CTCAAGTCTA
GCCATCATCA TGGTCAGTAT CTGGGGTGAC GCGATAAACA AAATGACCAG TGAGCCACAC
GAGCAAGTGA TAAAAGATGA ATTTGAAAAG ATGAAGACAA GGCTTTAA
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| Protein sequence | MSFGSYLAIA IYFGFLLFIG RYFYDKNASM NEYLLDNRQM GPVVTALSAG ASDMSGWMLL
GVPGALYATG VANVWMIAGL IVGAYCNYLF LAKRLRVYTE VASDSITIPD FLENRFKDRT
KILRIISGLI ILIFFTLYVS SGIIAGGKTF ESFFGLKFAY GAVFTLIIVV FYTFFGGFKA
VSITDAFQGL LMFCVLVSIP VVAYLNLDLP SDTNLIKEIS RLDANHLNPF RDQTFWGILG
LLAWGFGYFG QPHIIVRFMA IRDSKELAKA RRIGIGWMTI GLLGAIMSGL IGFVYFSQRG
GLSDPETVFL KLGELLFPPF FIGIIISAVL SAIMSTISSQ LLVTSSSVTK DFIFAFYKKE
VSQSTQTAIS RYAVVVVALI ATVLAFISTD NVLNVVGNAW AGFGASFGPV LLFSLYWKRM
SALGALAGMI AGGATVIFWI TSGLNAYVYE ILPGILTSSL AIIMVSIWGD AINKMTSEPH
EQVIKDEFEK MKTRL
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