| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0413 |
|---|
| Symbol | |
|---|
| ID | 5595601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1418818 |
|---|
| End bp | 1419588 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640929978 |
|---|
| Product | homoserine kinase (HSK; HK) |
|---|
| Protein accession | YP_001467257 |
|---|
| Protein GI | 157164376 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.862983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TATTAAAAGT TCTAGCGTTA GGGTTAGTTA TGTTTTTTAT AGGTTGTGGT
GATGATAGTG GCAAAAAAAC CGTTGCAAAT GCACCAGAAG CTAGCAAAGA GGTAGTTTAT
AAGGTAGGAT CAAGCGCTGA TTATCCTCCA TTTGAGTATC TTGACGATAA AAATCAAATC
GTTGGTTTTG AGATTGATCT TCTAAATGAG ATCACTAAAA AAACTGGGAT CAAATTTGAC
GTTGCAAATA TGAGTTTTGA TGGGCTAATA CCAGCTCTAA AAACAGGCAA GATAGATATC
GCGATAAGTG GCATGAGTGC AACTGATGAG AGAAGAAAGT CAGTTGATTT TACTAAGCCA
TATTATTTTT CAGAGAATTT GTTTATCCGC AAAAAAGGCT CAGATGTAAA TAAAGACAAC
CTTAAAGACA AGAAAATTTC AGCTCAAGTT GGCACACTTC AAGAAGAGGC AGCTAAAAAG
ATCACAACTC AGTCAATCCC AGCTGAAAAC GTAGCGGCAG CTATAATGTC ACTAAATGCC
GGTAAGATCG ATGTTGTGCT AACAGATAGC CCGATAGGTG TTGAGTTTTT AAAACAAAAT
CCAGACTTAG AGGAGTTTTT AAGGCTTCCT GACGGCACAG AGGGCTTTGC GATGGCATTT
GATAAGGGCA AACATACTGA TCTTATCAAA AAGATAGATG CTGCGATCGA AGAGCTACAA
AAATCTGGTG AATTTGACAA AATGCTCGCT AAATACGACC TTAAAAAATA A
|
|---|
| Protein sequence | MKNLLKVLAL GLVMFFIGCG DDSGKKTVAN APEASKEVVY KVGSSADYPP FEYLDDKNQI
VGFEIDLLNE ITKKTGIKFD VANMSFDGLI PALKTGKIDI AISGMSATDE RRKSVDFTKP
YYFSENLFIR KKGSDVNKDN LKDKKISAQV GTLQEEAAKK ITTQSIPAEN VAAAIMSLNA
GKIDVVLTDS PIGVEFLKQN PDLEEFLRLP DGTEGFAMAF DKGKHTDLIK KIDAAIEELQ
KSGEFDKMLA KYDLKK
|
|---|
| |