Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0355 |
Symbol | |
ID | 5597124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1047378 |
End bp | 1047791 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640929603 |
Product | nickel responsive regulator |
Protein accession | YP_001466894 |
Protein GI | 157164777 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000375481 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAGTG TTATACGTTT TAGTGTTTCT TTGCCTAGTC AATTACTAGA CGAACTAGAT AGAAAAGTTA GCGAACAAGG CTACGCTTCT AGGAGTGAAT TTACAAGGGA TTTGATCCGT GAAAAGATCG TAAACGATAG CTGGAAGGAC GCTGACGAGG AGTTGATTGG GGTTTTGACG CTCATTTATG TGCATCATCA CAACGATTTG GTGAATAAAA AAATGGATAT CGAGCATGAC TCTGATGTGA AGATCATCTG CACAAATCAC GTTCATGTCG ATCACCACAA CTGCTTAGAA ACGATCTCGA TAAGAGGTGA GGCTAGCAAG ATAGAGCGCT TTGCTGACAG GATTGCTGGC TTAAAGGGTG TTAAGTTTTC TAAACTTACA AAGGCCGCTG TGCCTAAATT TTAA
|
Protein sequence | MDSVIRFSVS LPSQLLDELD RKVSEQGYAS RSEFTRDLIR EKIVNDSWKD ADEELIGVLT LIYVHHHNDL VNKKMDIEHD SDVKIICTNH VHVDHHNCLE TISIRGEASK IERFADRIAG LKGVKFSKLT KAAVPKF
|
| |