| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0340 |
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| Symbol | |
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| ID | 5597461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1905657 |
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| End bp | 1906616 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640930457 |
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| Product | polysaccharide deacetylase domain-containing protein |
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| Protein accession | YP_001467727 |
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| Protein GI | 157165482 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0441347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA CGTTTTTAGC GTCACTTTTG ACGCTAACGT TTGCTTTGGC AGACGCTCAC
ATCCTAGTTT ATCACCGATT TGACGATCCA AGGCACGTTA GCACAGATAT TTCTATTCAA
AATTTAAGAG CTCAGTTTGA ATACTTCAAA AATAACGGCT ATGAAGTTGT CAAGCTATCA
AGGCTTGTCG ATGCGGTAAA TGCTGGCGAG CCGATTCCTG ATAACTGGAT CGTTATCACC
GTTGATGATG GATACAAAAG CTTTTACAAT AACGCTCTTA GCGTATTTAA AGAGTATAAC
TACCCATTTG CTTTGATGGT CTATGTAGAG GCAAGCGCGA ACAAATATGG CGATTATTTA
GACTTTGATC AGATCAAAGA GCTAGAAGCT TACGGCGAGA TCGGCTACCA CTCATACGCT
CATCCAAGGA TGACTAAACT TAGTGATGAG GCCTTAAGAG AGGACTTTCA AAAAGGCGTT
GAGACCTTTG AAAAACACAT GGGTTATAAG CCAAAATACT TTGCAGTCCC TTACGGTGAG
ATCGATAGTA GGGTCGTCTC TTTGGCAAAA GAATTTGGCT TTTTAGCACT TTTAAATCAA
AACTCAGGCG CAGTTTCAGA TAAAAGCGAT GTTTTTGATC TTTACAGAAC GCCAGTGATG
AATGGCACAA AGATAGCACT AACTTTTAAT AGCAAATTTT TAAATGCCCA GTGGATATTT
CCAGAGGGCT ATCCGCAAAA CAATGCGATC GACAAGCTCA TCATCAAGAC TGATACAAAC
GCAAGTGAGG GCAGTTTTTT CATGACTGGC TTTGACGGCT TTAGAAAAGT ACCTATGACA
AATGGCGTTT TTGAGTGTAA ATTTAACCCA CCACTTGATA AACGCAAAGT GTTAATGTCG
CTAAAAGTAG ATCATCACAG AAGCACAAAA CTTCTAATAA AGGACACCAA TGCTAAATAA
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| Protein sequence | MIKTFLASLL TLTFALADAH ILVYHRFDDP RHVSTDISIQ NLRAQFEYFK NNGYEVVKLS
RLVDAVNAGE PIPDNWIVIT VDDGYKSFYN NALSVFKEYN YPFALMVYVE ASANKYGDYL
DFDQIKELEA YGEIGYHSYA HPRMTKLSDE ALREDFQKGV ETFEKHMGYK PKYFAVPYGE
IDSRVVSLAK EFGFLALLNQ NSGAVSDKSD VFDLYRTPVM NGTKIALTFN SKFLNAQWIF
PEGYPQNNAI DKLIIKTDTN ASEGSFFMTG FDGFRKVPMT NGVFECKFNP PLDKRKVLMS
LKVDHHRSTK LLIKDTNAK
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