Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0288 |
Symbol | |
ID | 5597470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1939851 |
End bp | 1940438 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640930507 |
Product | putative outer membrane protein |
Protein accession | YP_001467772 |
Protein GI | 157164886 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTT CATTTTTGAA AGCTAGCATG ATTGCATGTG CGGTTTGCTC ATTTGCTATG GCAGAGGGAG CATTTATTGG TTACGAGGGC GGATATTCTT TTGCGTCAAA TTGGAAAGAG AAAACAACAG ATGGCGAGAG CGCAAGCGTT AGAAAAGGTC AATTTAACAG CGGTGTAAAA GCTGGTTATG ATTTTGACAG CTTTAGAGCT TACGGTGCTT ATTTTTATAG CTTTCAAACA AAAAAACAAA TAGAAGACGA TGATGACAGA TTTACTGTTA AATGGAAAAA ACACAGTTTG CTAGCTGGAG TTGATTACAC TCCAAGTATC ACTGAAGATA TTAAACTTGT TGCAGGTGGC TACACTGGCG TATCTAGACT TTTGATAAGC AGAGATGACG AGAATAAAAA ATTCTATGAC ACAGGATTTG TTTTAGGCGC TAAATTTGGT GCTGAATACC TACTTGATCA AAACAATATC CTAGAAGCTG GCATAAAAAC TGACTACACT TTCTATAAGG CAGATGACGT TAGCAGAGTT AGAGAGAGCA ACATCGGTCT TTACGTAGGC TACACTTATA AATTTTAA
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Protein sequence | MKSSFLKASM IACAVCSFAM AEGAFIGYEG GYSFASNWKE KTTDGESASV RKGQFNSGVK AGYDFDSFRA YGAYFYSFQT KKQIEDDDDR FTVKWKKHSL LAGVDYTPSI TEDIKLVAGG YTGVSRLLIS RDDENKKFYD TGFVLGAKFG AEYLLDQNNI LEAGIKTDYT FYKADDVSRV RESNIGLYVG YTYKF
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