| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0246 |
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| Symbol | dapE |
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| ID | 5596309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1656159 |
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| End bp | 1657250 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640930202 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001467479 |
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| Protein GI | 157163957 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAGTTA GCTTTTTAAA AGAGCTTTTA AACTTTCGTT CTATCACGCC AGATGATGCA
GGCAGTTTGG AATTTATCGC TAAATTTTTG CCTGATTTTG AGGCTAAATT TATAGAAAAA
AATGGCACAA AAAATCTCAT ACTTTCTAAA ATTTATGGAG ACGGGGAGCA TCTAGCCTTT
GCAGGGCATG TCGATGTCGT GCCACCAGGA GATGGCTGGG ATAGCGAGCC ATTTACCCCA
CTTGAAAAAG ATGGCTACAT CTACGCAAGG GGTTCGCAGG ATATGAAAAG TGGCGTGGCT
GCCTTTGTTT GTGCTGCTAA AGAGGCTAAA TTTGAAGGCA AACTAAGCCT CATTTTAACA
AGTGACGAAG AGGGCGATGG CACTTACGGC ACGCCTTTAG CGCTTGAATA TCTGCGTGAG
ATAAGGGATC TGCCCAAATT TTGCGTCGTG GCTGAGCCAA CTTGTGATAA GAAATTTGGC
GATAGCATAA AGGTCGGCAG ACGTGGCTCG ATAAATGGTA AGATCGTGAT AAAGGGCGTT
CAAGGACACG TGGCATACCC AGAAAAATGC ATAAATCCAG TAAATTTAAT AGCTCCACTT
TTAAGTAAGA TAGCTGACCA TGATATGGAC GGGGGGAGTG AGTTTTTTAG CCCAAGCAAG
ATCGTGGTGA CGGACATTCG TGGTGGCATG CAGGTTTGCA ACGTCACGCC AAGCGAGCTT
AGCATAATGT TTAACGTTAG AAACTCAAAT TTAACCGATG TAAATGACGT TGAGAGCTAT
CTTAGAAGCG TTTTGGATGG GCTTAGTTAC GAGCTTAGTA TAAAGCAAAG CTCAAAGAGA
TTTTTAACGA ACAAAGATAG CAAGATCGTA AGAAATTTAA TGGCATCTGT CACAAAGATC
ACTGGCGTTA CGCCACTTTT AAATACAAAG GGCGGCACGA GTGACGCTAG ACACTTTGCT
GAATTTGGCG TAGATGCGAT AGAATTTGGC GTCATAAATG ACCGCATACA CGCCAAAAAC
GAACGTGTCA GCATCAGCGA AGTAAATAAA CTTTACGAAG TTTTTAAAGA CCTTATAGAA
AATTTTTACT AA
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| Protein sequence | MVVSFLKELL NFRSITPDDA GSLEFIAKFL PDFEAKFIEK NGTKNLILSK IYGDGEHLAF
AGHVDVVPPG DGWDSEPFTP LEKDGYIYAR GSQDMKSGVA AFVCAAKEAK FEGKLSLILT
SDEEGDGTYG TPLALEYLRE IRDLPKFCVV AEPTCDKKFG DSIKVGRRGS INGKIVIKGV
QGHVAYPEKC INPVNLIAPL LSKIADHDMD GGSEFFSPSK IVVTDIRGGM QVCNVTPSEL
SIMFNVRNSN LTDVNDVESY LRSVLDGLSY ELSIKQSSKR FLTNKDSKIV RNLMASVTKI
TGVTPLLNTK GGTSDARHFA EFGVDAIEFG VINDRIHAKN ERVSISEVNK LYEVFKDLIE
NFY
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