| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0229 |
|---|
| Symbol | aroE |
|---|
| ID | 5596652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1639990 |
|---|
| End bp | 1640778 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640930188 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_001467465 |
|---|
| Protein GI | 157165583 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT TCGCAGTTTT TGGAGATCCG ATAGCTCACT CGGTATCTCC AAGACTACAC
AACAAAGCCA TTGCCGATCT AGCTCTTGAT GCCCTATATA CTAGGGTTTT GTTAAAAGAT
GGCAATGAGC TAATCAATAA ATTTAAATCC CTAAAACTAA ACGGCGCAAA TGTCACGCTC
CCGCATAAAG AATTTGCTCT AAATTTAGCC GATGAGGCCT CAGAAGCAGC ACGTAAAATA
GGCTCTGCAA ACACTTTGGT GCTAAAAAAT GAGAAAATTT ATGCCTACAA TACTGACGCA
CCTGGTTTTT TAAAAGCGAT ATCAAATTTC AAAGAGGCAA AAAGCGCCAT CATCCTTGGA
GCTGGAGGCA CTGCAAACGC CCTAGCCTAC GCACTTAGAT CACAAAACAT AGATGTTTGC
ATACTAAATA GAAGCAAGGC AAGACTTGAT AAATTTAAAG ATCAATACGA GTGCTTTAGC
TGGGATGACT ATAAAGAGCA CAAATTTGAT CTAGTAGTAA ATTCGACCTC AGCAGGGCTA
AAAGACGATC TTTTGCCAGC GCCAAAAAAG ATTTTAGATG GCATTTTAAA AAGCGCTAAA
TTTGCATTTG ATGTTATTTA CGGCAAGCAA ACGCCATTTT TAAAAGAGGC AAAAAGGCAA
AATTTAGCAT GCAAAGACGG AGCTGATATG CTCTTATATC AAGCGGTTTT AGCGTTAAAT
TTATTTTATA ATGGCAGCCT TGATGAGAAA AGGATAGAAA TTTCTATGCG AGAGGCTTTG
AGTTTATAA
|
|---|
| Protein sequence | MKTFAVFGDP IAHSVSPRLH NKAIADLALD ALYTRVLLKD GNELINKFKS LKLNGANVTL
PHKEFALNLA DEASEAARKI GSANTLVLKN EKIYAYNTDA PGFLKAISNF KEAKSAIILG
AGGTANALAY ALRSQNIDVC ILNRSKARLD KFKDQYECFS WDDYKEHKFD LVVNSTSAGL
KDDLLPAPKK ILDGILKSAK FAFDVIYGKQ TPFLKEAKRQ NLACKDGADM LLYQAVLALN
LFYNGSLDEK RIEISMREAL SL
|
|---|
| |