| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0174 |
|---|
| Symbol | rpoB |
|---|
| ID | 5596271 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 660860 |
|---|
| End bp | 665005 |
|---|
| Gene Length | 4146 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 38% |
|---|
| IMG OID | |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.709522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAATA GCTTATACTC AGGAAATCGT CTTAGAGTTG ACTTCTCTAA TGTCGTTAAA
GAGATAGACG TTCCGAACCT ACTACAACTA CAAAAAAAGA GCTTTGATAA TTTTTTAAAT
CTAAATAACA ATCAGACAGA AAGCGGTATC GAAAAAGTTT TTAAGTCGAT TTTCCCTATA
CATGATCCGC AAAATCGTTT GACTTTAGAA TATGTTAGCT CAGAGATTGG AAAACCAAAA
TATACAATCA GAGAGTGCAT AGAAAGAGGT CTTACATACT CTGTAAATTT AAAAATGAAA
ATACGCCTTA TCGTACATGA AAAAGACGAT AAGACTGGTG ATAAAGTTGG CGTTAAAGAT
ATAAAAGAGC AAGAAATTTT TATACGTGAA ATTCCGTTGA TGACAGATAG AATTTCATTT
ATTATAAATG GCGTTGAGCG TGTTGTTGTA AATCAACTCC ATAGAAGCCC TGGCGTTATC
TTTAAACAAG AAGAGAGTGC GACTGTTGCA AATAAACTTA TCTATACAGC TCAAATAATT
CCAGATCGCG GATCTTGGTT GCACTTTGAA TATGATACAA AAGATATTTT ATATGTTAGG
ATAAACAAGC GCAGAAAAGT GCCTGTAACT ATCTTGTTTA GGGCATTAGG ATATAAAAAA
CAAGACATTA TTAAGCTATT TTATCCAATA CAAAATTTAG TTATTAAAAA TAATAAATTT
TTAACTCTTT TCAATCCAGA GGATTATCTA GGAAGAGTTG AGTATGATAT AAAAAATGAA
GATGGAGAGG TTCTTCACCA AGCCGGCAAG CGCCTAACAA AGAAAAAAGC CGATAAATTA
ATCGAAGATG GCGTTAAATT TGTCGAGTAT CCTATCGAAG CACTTATTGG TAGATATTTG
GCAAACCCTG TGATAAACAC AGAAAGCGGT GAAATTTTAT ATGACACACT ATCTGCTCTT
GATGAGAATA AACTTGCAAA AATTTTAGCT GAGCATGAAA GTATCGACAT TATAAATAAC
TCTGCAGCCG GAGTTGATGA CGCTATAATA AATTCATTTA TCGCCGACAA TGATATGCTC
AAGGTTTTAA AACAAACTGA GGGCGTTTAT GATGAAAATG ACCTTGCTGC TATTAGAATT
TACAAGGTCA TGAGACCTGG TGAGCCGGTA GTTAAAGAGG CCGCAAAAAG CTTTGTAAAT
GATATATTGT TTAACCCTGA AAGATATGAC CTAACAAAAG TTGGTCGTAT GAAGATGAAC
CACAAGCTCT CACTTGATGT GCCAGAGTAT GTCACTTTGC TAACTAGCGA AGATATCATC
AAAACTGCAA AATATCTTAT AAAAGTTAAA AACGGACAAG GCCACATTGA CGACCGCGAC
CACCTTGGCA ACCGCCGTAT AAGATCGATC GGCGAGCTAC TTGCTAGTGA GCTTCACCTT
GGTTTTGTTA AGATGCAAAA GGCTATCCGT GATAAATTTA CAAGTCTAAG CAATAATACT
GACGAGATCA TGCCTTATGA TCTTATCAAT CCAAAAATGA TTACAGCAAC AATCATGGAA
TTTTTCACAG GCGGCCAGTT AAGTCAGTTT ATGGATCAGA CAAACCCACT TAGTGAGGTT
ACACACAAGC GCCGTCTATC TGCACTTGGC GAGGGCGGCT TAGTAAAAGA GCGTGCTGGA
TTTGAGGTGC GTGACGTTCA TCCAACTCAC TACGGCAGAA TTTGTCCGGT TGAGACTCCA
GAAGGTCAAA ATATCGGTCT TATAAACACT CTTTCAACTT ATGCAAAAGT AAATGACCTT
GGCTTTGTTG AGGCGCCTTA TAAAAAGGTT GTCGATGGCA AAGTGACTGA CGAGATAGTC
TATCTAACAG CGACACAAGA AGAGGGTAAT GTTATCGCTC CAGCATCAAC TAAGCTTGAT
GAAAATGGAC ATATTGTTGA GGATTTGATC GAGGTTAGAA AAGAGGGCGA GATGATGCTT
GCTCGTAGAG AAGATGTTAC CCTGATCGAC CTTTGCTCTG GTATGATAGC TGGTGTTGCA
GCTTCGCTTA TCCCTTTCCT AGAGCACGAC GACGCTAACC GTGCGCTTAT GGGCTCAAAC
ATGCAGCGTC AAGCTGTGCC ACTACTTCGC TCAACTGCTC CTATCGTTGG AACAGGTATG
GAGAGTGTTA TCGCAAGAGA TGCTTGGGAG AGCGTAAAAG CAAAACGAGG AGGCGTGGTT
GAAAAGGTTG ATAATAAAAA CATCTTTATC CTTGGTGAAG ATGAAGCTGG TCCATATATC
GATCACTACT CTTTAGAGAA AAATTTAAGA ACAAACCAAA ATACGACATT TTCACAACAT
CCGATCGTTA AAAAAGGTGA TGAGATCGTT GCTAATCAAA TTATAGCTGA TGGCCCAAGC
ATGGAAAAAG GCGAGCTAGC TATCGGTAAA AACGCACTAA TTGCATTTAT GCCTTGGAAT
GGCTACAACT ACGAGGACGC GATCGTTATT AGTGAAAAAA TGATACGTGA AGATGCCTTT
ACAAGCGTTC ATATTTATGA AAAAGAGATT GAGGCTCGTG AGCTAAAAGA CGGCGTTGAA
GAGATAACAA AAGATATACC AAACGTCAAA GAAGAGGAGC TTATGCACCT TGATGAAAGT
GGTATTGTTA AAATTGGTAC AGAGATCAAG CCTGGTATGA TCCTTGTTGG TAAAGTATCT
CCAAAAGGCG AAGTTAAGCC AACTCCAGAA GAGAGATTAC TTCGTGCTAT CTTTGGTGAA
AAAGCAGGCC ATGTTGTAAA TAAATCGCTC TATGCTTCTG CTTCAATGGA AGGCGTTGTT
GTTGATGTTA AAATTTTCAC TAAAAAAGGC TATGAAAAAG ATAGCAGAAC AAACAAGGCT
TACGAAGAAG AGAAGACACT TTTAGAAAAA GAGCATCATG ATAGACTGCT TATGCTAGAC
CGCGAAGAGA TGCTAAAAGT TACAGCACTT CTTTCTAAAA ACCCACTAGC TAGCGATCAA
GAGGTAAATA AAAAAGAGTA TAAAAAAGGC TCAAAGATCA ACAAAGCTGA CTTTGAGAAT
ATCAATAGAT TTACCCTAAA TGCTATCGTA AAGAGCTTTT CAAAAGATAT CCAAAAGAAA
TATGATGAGC TAAAAAATTA CTTCCAAAAT GAGAAGAAAA AGCTTAAAGA AGAGCACGAC
GCTAAGATAG AAATTTTAGA AAAAGATGAC ATTTTACCAA GCGGTGTTGT AAAACTTGTA
AAAGTTTATA TAGCTACAAA ACGCAAACTA AAAGTTGGCG ATAAGATGGC TGGACGTCAC
GGTAACAAAG GTATCGTTTC AAATATAGTT AGAGAAGTCG ATATGCCTTA TCTTCCAAGC
GGTCAGATCG TAGATATCGT GCTAAACCCA CTAGGCGTTC CAAGCCGTAT GAATATCGGT
CAAATTTTGG AGAGCCACCT TGGTCTTGTT GGCTACCGCT TAGGCGAGCA GATCAATGAA
ATTTTTGAGA CCAAAAAAGG CGAATGGATA AAAGAGCTAA GAGCTAAGAT GATAGAGATC
GCAAGCGTTG CTAAGCTAAT GGACGCTAAA AAAGCTCTTG GTAAGATGAG CGATGAGAAG
CTTCTTGAGT ATGCAAAAGA TTGGAGCAAT GGCGTAAGAT TTGCAACTCC GATTTTTGAA
GGCGTTAAAG CTGACGAATT TGCAAAACTA TTTGAGATGG CAAAGATAGA TAGCGATGGT
AAAACTGAGC TATATGACGG ACGTACAGGC TCAAAGATAA GAGAACGCGT TAATGTTGGT
TGTATGTATA TGCTAAAACT TCACCACTTG GTTGATGAAA AAGTTCACGC AAGAAGTACT
GGACCATACA GTCTTGTTAC ACAACAACCT GTCGGCGGTA AGGCGCTATT TGGTGGTCAA
AGGTTTGGTG AGATGGAGGT TTGGGCACTT GAGGCTTATG GTGCTGCTCA TACACTAAGA
GAGATGCTAA CTGTAAAATC AGACGATGTT GAGGGAAGAC TCTCTGCTTA CAAAGCTTTA
ACAAGAGGTG AAAACGTTCC TGAGACTGGT ATCCCTGAGA CGTTCTTTGT TCTAACAAAC
GAGCTAAAAT CACTAGCTCT TGATGTGGAA GTATATGATG AGGATGAGAC AAATGAAACT
AACTAA
|
|---|
| Protein sequence | |
|---|
| |