| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0152 |
|---|
| Symbol | rarD |
|---|
| ID | 5596226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 862651 |
|---|
| End bp | 863481 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640929429 |
|---|
| Product | RarD protein |
|---|
| Protein accession | YP_001466724 |
|---|
| Protein GI | 157164409 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | [TIGR00688] rarD protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.886029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGGAT TTTTGGCGGT TTATTTCAAC CTATTTAGCA AAGATGTCGA TGCTTATGAA
ATTTTAGCCC ACAGAATCAT CTGGTCGTTT TTTCTAATGG CAGCGGTCAT ATATCTTAGT
GGCAAAATGA ATGAAATTTT GACCCTGCTT AAAGATATAG GCTCGCTCAA AGCGCTATTT
TTAAGCGGCA CGCTCATTAG CATAAACTGG GGCGTCTACG TCTATGCAGT TGGCAACGGT
AAAATTTTAG ATACCAGCAT CGGCTACTTT ATCAATCCTT TAATAAACAT GCTCCTTGGC
GTCATCGTCT TTAAAGAACG CCTTGGCAAA AGTGGTGTCG TAGCCGTTTG TATCGTCATG
GTCGCAGTTT TTGTGCAAAT TTACTTTCAA GGTGGCTTGC CGCTAGTCTC CATCATCTTG
CCACTATCCT TTGGGCTTTA CGGTGTGGTT AGAAAAAAGG CAAAGATTAG CGCATTTAAC
GGACTTTTTA TCGAAACGCT CTTTATTTTT CCGTTTGCTT TTGGCTACGT TTTATGGCTG
GTTTTTCACT CACAAAGCCA CTTTGGACTA AACAAAGACT CGGTTTTGAT GATCGCCTCA
AGCCTCGTCA CCATCGTGCC GCTAGTCGCT TTTAATGCAG CTGCTACAAG GATAAATTTA
ACCACTATCG GCTACTTGCA ATACATCTCG CCAACCATAG CGATACTCTG CGCTGTCTTT
ATCTTTAACG AAACCTTAGA CGTCTATAAG ATCGTCTCGT TTTGCCTCAT TTGGCTGGCA
CTTGCCATCA TCAGCATAAA CAAAATCACA AAAAGGAATA AAAATGAATA G
|
|---|
| Protein sequence | MWGFLAVYFN LFSKDVDAYE ILAHRIIWSF FLMAAVIYLS GKMNEILTLL KDIGSLKALF
LSGTLISINW GVYVYAVGNG KILDTSIGYF INPLINMLLG VIVFKERLGK SGVVAVCIVM
VAVFVQIYFQ GGLPLVSIIL PLSFGLYGVV RKKAKISAFN GLFIETLFIF PFAFGYVLWL
VFHSQSHFGL NKDSVLMIAS SLVTIVPLVA FNAAATRINL TTIGYLQYIS PTIAILCAVF
IFNETLDVYK IVSFCLIWLA LAIISINKIT KRNKNE
|
|---|
| |