Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0150 |
Symbol | |
ID | 5595857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 864554 |
End bp | 865894 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640929431 |
Product | 3-deoxy-7-phosphoheptulonate synthase |
Protein accession | YP_001466726 |
Protein GI | 157165316 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00571678 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTGGA ACAGAGATAG CTGGAGAGAA TTTAATATCC TGCAACAACC AACTTATCCA AATTTACAAG AGTTAAAAGA GACTGAAGAA AAGCTAAAAA CACTTCCGCC TTTGGTCTTT GCCGGAGAGG CTAGAATTCT CAAAGATGAG CTTGCGAAAG TTTGCAACGG CGAGGCATTT TTGCTTCAAG GTGGCGACTG CGCTGAGAGC TTTACAAATT TTAATGCAAA CAACATCAGA GATATGTTTA AGGTCCTGCT TCAAATGGCG ATAGTTTTGA CATTTGCAGG CGGCTGTCCA GTGGTCAAAG TAGGCCGTGT GGCAGGGCAG TTTGCAAAGC CTAGAAGTAG CGACTATGAA GAGGTAAATG GCGTTAGGCT GCCAAGCTAT AGAGGCGACA TCATAAATGG CTTTGAATTT GACGAGCAGG CAAGAATCCC TGACCCAAAA CGCATGATAG AGGCCTACTA TCAAAGCGCC TCGACGATGA ACCTCTTAAG AGCCTTTTCA AGGGGTGGTT TGGCTGACCT TCATCAGGTG CATAAGTGGA ATTTGGGCTT TGTTAAAAAG CCAGAGATCA GCGAGCAGTA CGCAAAACTA GCCGATGATC TAACTAAAAC GCTATCTTTC ATGGCGGCTT GTGGTATCAC TTCGGCAAAC ACCCCAGCGA TAAATCAAAC AGCAGTTTAT ACATCTCACG AGGCGCTACT TTTGCCTTAT GAAGAGGCGC TAACTAGGGT TGATAGCCTT AGTGGCGAGT GGTATGATTG CTCGGCTCAT ATGCTTTGGA TAGGCGAGAG AACACGCGGC GTAAACGACG CTCACGTGCA TTTTTTAAGT GGCGTGAAAA ATCCTATCGG CGTTAAGATC GGACCAAGTG CTAATGCAGA AGACGTCATT GCTCTTGCAA ATAAGCTAAA CCCAGAGAAT GAAGCTGGCA GACTAAATGT GATAATCAGA ATGGGCGCTG ATAAGATCGG CGAAAATTTA CCTAAAATTT TAAGAGAGCT AAAACGCGAG GGGCTAAATA TCGTCTACAG CATAGACCCG ATGCACGGCA ACACAGTTAA GACTTCAAAT AACTACAAAA CTCGTGAGTT TGACAAGGTT ATAAGCGAGG TTAGAAGCTT TTTTGAAATT CACAAAGCTG AGGGCACAAG AGCTGGCGGC GTACATCTTG AGATGACCGG TCAGGACGTG ACTGAGTGCA CGGGCGGGGC TTTAAAACTA ACAGAGAGCT CACTGGAGCA AAGGTATGAG ACGCAGTGCG ACCCAAGACT AAACGCTGAT CAGGCGCTTG AGCTCGCATT TTTGATGGCA GATCTAGTTA AAAAAGCTTA A
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Protein sequence | MTWNRDSWRE FNILQQPTYP NLQELKETEE KLKTLPPLVF AGEARILKDE LAKVCNGEAF LLQGGDCAES FTNFNANNIR DMFKVLLQMA IVLTFAGGCP VVKVGRVAGQ FAKPRSSDYE EVNGVRLPSY RGDIINGFEF DEQARIPDPK RMIEAYYQSA STMNLLRAFS RGGLADLHQV HKWNLGFVKK PEISEQYAKL ADDLTKTLSF MAACGITSAN TPAINQTAVY TSHEALLLPY EEALTRVDSL SGEWYDCSAH MLWIGERTRG VNDAHVHFLS GVKNPIGVKI GPSANAEDVI ALANKLNPEN EAGRLNVIIR MGADKIGENL PKILRELKRE GLNIVYSIDP MHGNTVKTSN NYKTREFDKV ISEVRSFFEI HKAEGTRAGG VHLEMTGQDV TECTGGALKL TESSLEQRYE TQCDPRLNAD QALELAFLMA DLVKKA
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