Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0131 |
Symbol | omp |
ID | 5595657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 881335 |
End bp | 882642 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640929449 |
Product | peptidoglycan associated lipoprotein |
Protein accession | YP_001466744 |
Protein GI | 157164709 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00102865 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACAAAT TTACTAGATC TTTTGCGCTA AAAATAACAG GCGCCCTGCT CATCTCAAGC GTAGCAGTAA ATGCGCTTTT TGCTAAAACC GAAGATGAGG CGAGTGCGAA ACTTGAAGCA CTTTCAAAAC TTACAAAAAC CATCTCAACC GTTGAAAAAT ACTACGTTGA TGACATTAAA TTTAAAGAGA TAATCGACAA AGCCATCGCT GGTTTGATGC AAAATTTGGA CGCTCACTCG AGCTTTTTAA ATGAAAAAGC ATATAAAGAT ATGCAGGTGC AAACAAGCGG CGAATTTGGC GGACTTGGCA TAACAGTTGG CATGAAAGAT AGCGCACTAA CCGTTATCTC GCCTATCGAG GACACTCCAG CTGATAAAGC AGGCATAAAA GCTGGCGATA TCATTTTAAG GATCGATGGC AACTCAACTA TCGGCACAAC GATAGATGAA GCTGTAAATA AGATGCGCGG CAAGCCAAAA ACTCCGATAA CAATTACGAT CTTAAGAAAA GGCGAGCAAA AGCCATTTGA CGTAAAAATC ATAAGAGATC TTATAAAGGT TGAGTCTGTC TATGCAAAAA TGATAGAAAA TGAAAACATC CTTTATATAC GTGTCACAAA TTTTGACAAA AACGTCGTCA CAAAGGTAAA AGATGCGATC AAAGAGCATC CAAAAGCAAA TGGCATCATA CTTGATCTTA GAAACAACCC TGGCGGTCTT TTAAATCAAG CTGTTGATCT AGTGGATCTT TTCGTAGATA ACGGCATCAT CGTTTCTCAA AAAGGTCGTG ATGCATCTGA AAATGTAGAG TATAAAGCAA GCGCTAGCAA AACCTTATCA AAACTCCCGC TAGTTGTCCT TGTAAATGGC GGAAGTGCAA GCGCTAGCGA GATCGTAAGT GGCTCACTGC AAGATCACAA GCGTGCGGTG ATAATCGGCG AAAACACATT TGGTAAAGGC AGTGTTCAGG TGATCTTACC AATAGACGAT ACAGAAGCGC TAAGACTAAC CATCGCAAGA TACTACTTGC CAAGCGGCAG AACTATCCAA GCTGTTGGCG TAACTCCTGA TGTAGTCGTG CATCCTGGCA AAGTACCACA AAGTGATGAT AGCGCATTTA GTATCAAAGA GAGCGAACTA AAAGCACACC TAAAAAGCGA GCTAAACAAG ATAAATCCAA CAAGCGAGGG CAATAAAACT GAAGCAAAAG ATGATAAAAA TATAATCACA CAGAAAAAAG TCGATGAAGA TATTCAGTTA AAAACAGCGA TTGATACGAT CAAAATTTTA AAGATAAAAC AACAATAA
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Protein sequence | MNKFTRSFAL KITGALLISS VAVNALFAKT EDEASAKLEA LSKLTKTIST VEKYYVDDIK FKEIIDKAIA GLMQNLDAHS SFLNEKAYKD MQVQTSGEFG GLGITVGMKD SALTVISPIE DTPADKAGIK AGDIILRIDG NSTIGTTIDE AVNKMRGKPK TPITITILRK GEQKPFDVKI IRDLIKVESV YAKMIENENI LYIRVTNFDK NVVTKVKDAI KEHPKANGII LDLRNNPGGL LNQAVDLVDL FVDNGIIVSQ KGRDASENVE YKASASKTLS KLPLVVLVNG GSASASEIVS GSLQDHKRAV IIGENTFGKG SVQVILPIDD TEALRLTIAR YYLPSGRTIQ AVGVTPDVVV HPGKVPQSDD SAFSIKESEL KAHLKSELNK INPTSEGNKT EAKDDKNIIT QKKVDEDIQL KTAIDTIKIL KIKQQ
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