| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0131 |
|---|
| Symbol | omp |
|---|
| ID | 5595657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 881335 |
|---|
| End bp | 882642 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640929449 |
|---|
| Product | peptidoglycan associated lipoprotein |
|---|
| Protein accession | YP_001466744 |
|---|
| Protein GI | 157164709 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00102865 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACAAAT TTACTAGATC TTTTGCGCTA AAAATAACAG GCGCCCTGCT CATCTCAAGC
GTAGCAGTAA ATGCGCTTTT TGCTAAAACC GAAGATGAGG CGAGTGCGAA ACTTGAAGCA
CTTTCAAAAC TTACAAAAAC CATCTCAACC GTTGAAAAAT ACTACGTTGA TGACATTAAA
TTTAAAGAGA TAATCGACAA AGCCATCGCT GGTTTGATGC AAAATTTGGA CGCTCACTCG
AGCTTTTTAA ATGAAAAAGC ATATAAAGAT ATGCAGGTGC AAACAAGCGG CGAATTTGGC
GGACTTGGCA TAACAGTTGG CATGAAAGAT AGCGCACTAA CCGTTATCTC GCCTATCGAG
GACACTCCAG CTGATAAAGC AGGCATAAAA GCTGGCGATA TCATTTTAAG GATCGATGGC
AACTCAACTA TCGGCACAAC GATAGATGAA GCTGTAAATA AGATGCGCGG CAAGCCAAAA
ACTCCGATAA CAATTACGAT CTTAAGAAAA GGCGAGCAAA AGCCATTTGA CGTAAAAATC
ATAAGAGATC TTATAAAGGT TGAGTCTGTC TATGCAAAAA TGATAGAAAA TGAAAACATC
CTTTATATAC GTGTCACAAA TTTTGACAAA AACGTCGTCA CAAAGGTAAA AGATGCGATC
AAAGAGCATC CAAAAGCAAA TGGCATCATA CTTGATCTTA GAAACAACCC TGGCGGTCTT
TTAAATCAAG CTGTTGATCT AGTGGATCTT TTCGTAGATA ACGGCATCAT CGTTTCTCAA
AAAGGTCGTG ATGCATCTGA AAATGTAGAG TATAAAGCAA GCGCTAGCAA AACCTTATCA
AAACTCCCGC TAGTTGTCCT TGTAAATGGC GGAAGTGCAA GCGCTAGCGA GATCGTAAGT
GGCTCACTGC AAGATCACAA GCGTGCGGTG ATAATCGGCG AAAACACATT TGGTAAAGGC
AGTGTTCAGG TGATCTTACC AATAGACGAT ACAGAAGCGC TAAGACTAAC CATCGCAAGA
TACTACTTGC CAAGCGGCAG AACTATCCAA GCTGTTGGCG TAACTCCTGA TGTAGTCGTG
CATCCTGGCA AAGTACCACA AAGTGATGAT AGCGCATTTA GTATCAAAGA GAGCGAACTA
AAAGCACACC TAAAAAGCGA GCTAAACAAG ATAAATCCAA CAAGCGAGGG CAATAAAACT
GAAGCAAAAG ATGATAAAAA TATAATCACA CAGAAAAAAG TCGATGAAGA TATTCAGTTA
AAAACAGCGA TTGATACGAT CAAAATTTTA AAGATAAAAC AACAATAA
|
|---|
| Protein sequence | MNKFTRSFAL KITGALLISS VAVNALFAKT EDEASAKLEA LSKLTKTIST VEKYYVDDIK
FKEIIDKAIA GLMQNLDAHS SFLNEKAYKD MQVQTSGEFG GLGITVGMKD SALTVISPIE
DTPADKAGIK AGDIILRIDG NSTIGTTIDE AVNKMRGKPK TPITITILRK GEQKPFDVKI
IRDLIKVESV YAKMIENENI LYIRVTNFDK NVVTKVKDAI KEHPKANGII LDLRNNPGGL
LNQAVDLVDL FVDNGIIVSQ KGRDASENVE YKASASKTLS KLPLVVLVNG GSASASEIVS
GSLQDHKRAV IIGENTFGKG SVQVILPIDD TEALRLTIAR YYLPSGRTIQ AVGVTPDVVV
HPGKVPQSDD SAFSIKESEL KAHLKSELNK INPTSEGNKT EAKDDKNIIT QKKVDEDIQL
KTAIDTIKIL KIKQQ
|
|---|
| |