Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0125 |
Symbol | |
ID | 5596651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1079032 |
End bp | 1079670 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640929627 |
Product | hypothetical protein |
Protein accession | YP_001466918 |
Protein GI | 157164475 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATAG TTTTAAAAGA TCTACTTGAA AAGATCGAAA ATTTAAGCAA AGACGTGACG CTAGTTGCCG TTAGCAAAAA TGTAACATGC ACTGAAGTAA GGGAGCTTTA CGCACAAGGG CAGAGAAATT TTGGCGAAAA CAGAGTCCAA GAGCTAGCCA AAAAAGAGCT AGAACTACAA AATTTCACTG ACATTAAATG GCACATGATC GGACGTCTGC AAAACAATAA AATCAATCAA ATGATAAGCC TAAAGCCGGT GCTTTGGCAA AGCTGCGATA GCTTCGAAAG AGCCGTAGAG GTTGATAAAA GACTTAGCTA CAAGCTAGAT ACGCTACTTC AGATAAACTC GGCTGATGAA GATACAAAGC AAGGTGTGAG CGTGGCAAAT GCGACTGAAA TTTATGAGCG CATCCAAAGC GAGTGCAAAA ATATAAATTT GAAAGGCGTG ATGAGCATCG GAGCGCATGT GGATGAGCCA AAAGAGGTGC AAAAAAGCTT TGAACTAACA TATAAAATTT ATGAGAGCCT AAAACCAAAA GGCGCAAGCA TCTGCTCGAT GGGCATGAGT AGCGACTTCG AACTAGCGAT AAAATCTGGC TCAAATATGA TCCGCCTTGG AACAATGCTT TATCTATAA
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Protein sequence | MMIVLKDLLE KIENLSKDVT LVAVSKNVTC TEVRELYAQG QRNFGENRVQ ELAKKELELQ NFTDIKWHMI GRLQNNKINQ MISLKPVLWQ SCDSFERAVE VDKRLSYKLD TLLQINSADE DTKQGVSVAN ATEIYERIQS ECKNINLKGV MSIGAHVDEP KEVQKSFELT YKIYESLKPK GASICSMGMS SDFELAIKSG SNMIRLGTML YL
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