| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0123 |
|---|
| Symbol | |
|---|
| ID | 5597459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1076888 |
|---|
| End bp | 1077904 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640929625 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001466916 |
|---|
| Protein GI | 157165001 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0266583 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAACCG GAAACGCTAT AATCTATCTA GCTAGCTTCG TCGTGGTCGC GGCGGGACTA
AAGACTGCTA GCGTCGTCGT GCTACCGTTT TTGATGGCGG TTTTTATCGC TATCGTGGCG
ACGCCTGCGA TAAATGCGCT CGAAAAGCTC AAATTTCCGC GCGTTTTAGC CTTCGCGCTA
ATTACGGCGG TGGTGTTTTT GTCGCTGGGA TTTATCGCAA ACACCGTGAT AAAGACGATA
AACGGGCTAG TTAGCTACAT GCCAGAGCTT CAGAGCAAAT TTAAAGCCCT CGCCGATCAT
TACCACCAGA TGCTAGCGAG CCGCGGCCTA ATCGATCCCG AGAGCATCGC CGCGCCCGCA
GACTTTGATA TAAATAAAAT TTTTGCCGTG CTGGGCGGAT TTTTAAGGAG CGGCACCGAG
CTCGTTTCAA AGAGCTTTTT CGTCTTTTTG CTCGTTACTT TTATGCTTTT TGAAGTGCAG
GTATTTTCTC AAAAAGTCGA GTATTTTGCG AGCAAAAATC CGCAAACGAA CCAGATCGTA
GATACGTTTA TATCAAATCT CAAGCGCTAT CTCGCGATCA AGTCCGCAGC GTCGTTTGCG
ACGGGCGTTT TTATATTTAT CGGGCTAAAT TTCATCGGCG TGCCCTACGC GCCGCTTTGG
GGTATTTTAG CTTTCGTGCT AAATTTTATC CCGACGATCG GCTCTATTAT CGCGGCCGTC
CCGGCGCTTT TGGTGGCGCT TTTGCTAAAC GACGCAGCCT CTTGTGCTTG GACTGCGGCA
CTATATCTAG CCGTAAATAC CGTCATCGGC AACTTTATCG AGCCGAAATT TCTAGGCAAA
GGCCTTGGTA TAAGCACGCT TGTGGTGCTT TTGAGCCTAC TTTTTTGGGG ATTTTTGTTC
GGCATCGGCG GTATGTTTTT AGCAGTACCG CTTACCATGA GCCTAAAGAT CGCGCTTGAC
GCAAACCCGA GCACGAAATT TATCGCTGTT TTGCTCAGCG ATAAACTAGA GCGGTAA
|
|---|
| Protein sequence | MRTGNAIIYL ASFVVVAAGL KTASVVVLPF LMAVFIAIVA TPAINALEKL KFPRVLAFAL
ITAVVFLSLG FIANTVIKTI NGLVSYMPEL QSKFKALADH YHQMLASRGL IDPESIAAPA
DFDINKIFAV LGGFLRSGTE LVSKSFFVFL LVTFMLFEVQ VFSQKVEYFA SKNPQTNQIV
DTFISNLKRY LAIKSAASFA TGVFIFIGLN FIGVPYAPLW GILAFVLNFI PTIGSIIAAV
PALLVALLLN DAASCAWTAA LYLAVNTVIG NFIEPKFLGK GLGISTLVVL LSLLFWGFLF
GIGGMFLAVP LTMSLKIALD ANPSTKFIAV LLSDKLER
|
|---|
| |