| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0121 |
|---|
| Symbol | |
|---|
| ID | 5597213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1075520 |
|---|
| End bp | 1076308 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640929623 |
|---|
| Product | 7-alpha-hydroxysteroid dehydrogenase |
|---|
| Protein accession | YP_001466914 |
|---|
| Protein GI | 157163926 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0883782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA TACTAAACGA ATTTAAAGGT AAAACGCTAG TCATCAGCGG CGGCACTAGA
GGCATCGGCA GAGCCATAGT CGAAGAATTT GCAAAAGCTG GCGTAAATAT AGCATTTACC
TATAACTCAA ACGAGGAGCT TGCCAAAGAG CAGGCAAAAG AGCTTGAGGC TACTTACAAG
ATAAAAGCTA GAGCCTACGC GCTAAACATC CTTGAGCCAG AGACTTATAA AGAGCTATTT
TTAAAGATAG ATGAGGACTT TGACAGGGTT GATTTTTTCA TCTCAAATGC TATCATCTCA
GGCCGCGCAG TAGCTGGCGG ATACACTAAA TTTATGAAGC TAAAACCAAG AGGTATAAAT
AATATCTTCA CAGCAACTGT AAATGCCTTT GTCGTGGGCG CACAAGAGGC TGCAAAACGC
ATGGAAAAAG TGGGTGGCGG CAGTATCATT AGCCTAAGCT CAACTGGAAA TTTAGTCTAT
ATCGAAAACT ACGCAGGCCA CGGCACAGCA AAAGCAGCCG TTGAAGCGAT GGCAAGATAC
GCTGCGACAG AGCTTGGCGA GAAAAATATC CGCGTAAACG TCGTAAGCGG CGGCCCCATC
GAGACAGACG CGCTAAGAGC CTTTACAAAC TACGAAGAGG TGCGCGATAT GACGGCAAAG
CTTAGCCCGC TAAACCGCAT GGGACAGCCG ACCGACCTAG CTGGAGCATG TCTATTTTTA
TGCTCATCTA AGGCTAGCTG GGTGACTGGA CATACATTTA TAATAGATGG TGGCACGACT
TTTAAATGA
|
|---|
| Protein sequence | MKDILNEFKG KTLVISGGTR GIGRAIVEEF AKAGVNIAFT YNSNEELAKE QAKELEATYK
IKARAYALNI LEPETYKELF LKIDEDFDRV DFFISNAIIS GRAVAGGYTK FMKLKPRGIN
NIFTATVNAF VVGAQEAAKR MEKVGGGSII SLSSTGNLVY IENYAGHGTA KAAVEAMARY
AATELGEKNI RVNVVSGGPI ETDALRAFTN YEEVRDMTAK LSPLNRMGQP TDLAGACLFL
CSSKASWVTG HTFIIDGGTT FK
|
|---|
| |