Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0117 |
Symbol | |
ID | 5596805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1070520 |
End bp | 1072244 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640929619 |
Product | lipid A export ATP-binding/permease protein MsbA |
Protein accession | YP_001466910 |
Protein GI | 157165032 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATT TTGGCTTAAA AGATGTGCTA AAGCGCTTTG GTCCATATTT TAAAGACTAT ATCCCACACT TCATCTTTGC CATCATCGGC ATGGGGCTTG CCAGTGGCGG AACGGCGGTA AGTGCCTATC TGGTAGAGCC TGTGCTAAAT AAAATTTTCG TTGAGAAAAA CGAAAAGCTG CTCTACATCC TGCCTTGCGC CATCATCGCG ATCTACGTTA TAAAAAACAT TGGAACCTTC ATGCAGGCCT ATTTTACGGC ATATATCGGG CAAGATACGA TTAGAAGATT TCGCGAAAAG ATGGTTGCAA ACCTTTTAAA TTTAGATATG GATTTTTTCA ATGAATTTAG AACCGGCGAG CTAATCAGTA GAACAACAAA CGATATCGAT CGCATAAGAT CGATAGTCTC AAGCATCATA CCTGAGCTAA CAAGAGAGTC AGTCACCATT ATAGGACTTC TTTGCGTCGT CATCTATCAA AGTCCAAAGC TGGCGTTTTT CGCCCTTGTC GTCATGCCAG TGGCGATCTA TCCGATCTCG CGCCTTGCTA AAAGGATGAA GAAAATTTCA AAGCAGTCGC AAGAAAAAAC ATCAGACATC ACCTCTGCGC TTAGTGAAAT TTTTACAAAT ATCGAGATAA TCAAAGCAAA TAACGCCCAA GAATACGAGC ATTCACGCTT TGTTGATGAA AATAACAAAT TTTTTAGGCT AAATTTAAAA AGCGTCAAGA TCGAGCAGCT AGTAAGCCCG CTAATGGAGA CCATAGGCTC AATAGGCGTG GCAGCAGTAA TCATCATAGG CGGCAAAGAC GTCATAGACG GGCATATAAA CATGGGCGCA TTCTTTTCAT TTCTAACAGC GCTTTTCATG CTCTACACCC CGCTAAAACG CATCGTAAAT ATCTATAATA AGATGCAAGA CGCCATCGCA GCAAGCGAGA GGACGTTTTT CTTGATGGAT AAGGTAAGCC AGATAAAAGA TGGCCAAAAT GAGCTAAACG AAGAGATAAA TTTGATCAAA TTTAACGACG TCCGCCTAAG CTACGGCGAC AAAGAGGTCT TAAAAGGGAT AAATTTAGAG GCAAATAAGT CAGAATTTAT AGCCCTTGTT GGCTCAAGTG GTGGCGGAAA AAGCTCGCTT ATGAATTTGC TTATGAGATT TTACGATGTA AATGGCGGAG AAATTTTGAT AAACGGCACA AATTTAAAAG ATATCAAAAT TCACTCACTT CGCCAAAATA TCGGGCTTGT AACCCAGCGC GTCTATATCT TTAACGACAC AGTTGCTAAA AACGTAGCTT ACGGCAGAGA ATTTAACGAA GATGCCGTGA TAAACGCACT AAAACTAGCC AATGCCTATG AGTTTGTAAG CAAACTAGAT AACGGCATAA ACACTATCTT AAATGAATTT GGCACCAACC TCTCAGGCGG TCAAAGACAG CGCATCGCCA TAGCAAGAGC ACTCTATCAA AATCCACAAA TCCTAATCTT TGACGAGGCT ACTTCAGCGC TTGATAACGA GAGCGAAAAA GAGATCACAA AGGCGATAAA TAATCTAAGA AGCAAAAAGA TCATCTTTGT CATCGCTCAC CGCCTAAGCA CAGTTGAAAA TGCCGACAAA ATCGCAGTTT TAAGTGATGG CAAGATCATT GATAGTGGAA GCGACGAGGA GCTTAGCAAA AGAAATGAAA TTTATGCAAA ACTTAAGGGC AAAGCCTTAG TTTAA
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Protein sequence | MNNFGLKDVL KRFGPYFKDY IPHFIFAIIG MGLASGGTAV SAYLVEPVLN KIFVEKNEKL LYILPCAIIA IYVIKNIGTF MQAYFTAYIG QDTIRRFREK MVANLLNLDM DFFNEFRTGE LISRTTNDID RIRSIVSSII PELTRESVTI IGLLCVVIYQ SPKLAFFALV VMPVAIYPIS RLAKRMKKIS KQSQEKTSDI TSALSEIFTN IEIIKANNAQ EYEHSRFVDE NNKFFRLNLK SVKIEQLVSP LMETIGSIGV AAVIIIGGKD VIDGHINMGA FFSFLTALFM LYTPLKRIVN IYNKMQDAIA ASERTFFLMD KVSQIKDGQN ELNEEINLIK FNDVRLSYGD KEVLKGINLE ANKSEFIALV GSSGGGKSSL MNLLMRFYDV NGGEILINGT NLKDIKIHSL RQNIGLVTQR VYIFNDTVAK NVAYGREFNE DAVINALKLA NAYEFVSKLD NGINTILNEF GTNLSGGQRQ RIAIARALYQ NPQILIFDEA TSALDNESEK EITKAINNLR SKKIIFVIAH RLSTVENADK IAVLSDGKII DSGSDEELSK RNEIYAKLKG KALV
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