Gene CCC13826_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0117 
Symbol 
ID5596805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1070520 
End bp1072244 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content41% 
IMG OID640929619 
Productlipid A export ATP-binding/permease protein MsbA 
Protein accessionYP_001466910 
Protein GI157165032 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TTGGCTTAAA AGATGTGCTA AAGCGCTTTG GTCCATATTT TAAAGACTAT 
ATCCCACACT TCATCTTTGC CATCATCGGC ATGGGGCTTG CCAGTGGCGG AACGGCGGTA
AGTGCCTATC TGGTAGAGCC TGTGCTAAAT AAAATTTTCG TTGAGAAAAA CGAAAAGCTG
CTCTACATCC TGCCTTGCGC CATCATCGCG ATCTACGTTA TAAAAAACAT TGGAACCTTC
ATGCAGGCCT ATTTTACGGC ATATATCGGG CAAGATACGA TTAGAAGATT TCGCGAAAAG
ATGGTTGCAA ACCTTTTAAA TTTAGATATG GATTTTTTCA ATGAATTTAG AACCGGCGAG
CTAATCAGTA GAACAACAAA CGATATCGAT CGCATAAGAT CGATAGTCTC AAGCATCATA
CCTGAGCTAA CAAGAGAGTC AGTCACCATT ATAGGACTTC TTTGCGTCGT CATCTATCAA
AGTCCAAAGC TGGCGTTTTT CGCCCTTGTC GTCATGCCAG TGGCGATCTA TCCGATCTCG
CGCCTTGCTA AAAGGATGAA GAAAATTTCA AAGCAGTCGC AAGAAAAAAC ATCAGACATC
ACCTCTGCGC TTAGTGAAAT TTTTACAAAT ATCGAGATAA TCAAAGCAAA TAACGCCCAA
GAATACGAGC ATTCACGCTT TGTTGATGAA AATAACAAAT TTTTTAGGCT AAATTTAAAA
AGCGTCAAGA TCGAGCAGCT AGTAAGCCCG CTAATGGAGA CCATAGGCTC AATAGGCGTG
GCAGCAGTAA TCATCATAGG CGGCAAAGAC GTCATAGACG GGCATATAAA CATGGGCGCA
TTCTTTTCAT TTCTAACAGC GCTTTTCATG CTCTACACCC CGCTAAAACG CATCGTAAAT
ATCTATAATA AGATGCAAGA CGCCATCGCA GCAAGCGAGA GGACGTTTTT CTTGATGGAT
AAGGTAAGCC AGATAAAAGA TGGCCAAAAT GAGCTAAACG AAGAGATAAA TTTGATCAAA
TTTAACGACG TCCGCCTAAG CTACGGCGAC AAAGAGGTCT TAAAAGGGAT AAATTTAGAG
GCAAATAAGT CAGAATTTAT AGCCCTTGTT GGCTCAAGTG GTGGCGGAAA AAGCTCGCTT
ATGAATTTGC TTATGAGATT TTACGATGTA AATGGCGGAG AAATTTTGAT AAACGGCACA
AATTTAAAAG ATATCAAAAT TCACTCACTT CGCCAAAATA TCGGGCTTGT AACCCAGCGC
GTCTATATCT TTAACGACAC AGTTGCTAAA AACGTAGCTT ACGGCAGAGA ATTTAACGAA
GATGCCGTGA TAAACGCACT AAAACTAGCC AATGCCTATG AGTTTGTAAG CAAACTAGAT
AACGGCATAA ACACTATCTT AAATGAATTT GGCACCAACC TCTCAGGCGG TCAAAGACAG
CGCATCGCCA TAGCAAGAGC ACTCTATCAA AATCCACAAA TCCTAATCTT TGACGAGGCT
ACTTCAGCGC TTGATAACGA GAGCGAAAAA GAGATCACAA AGGCGATAAA TAATCTAAGA
AGCAAAAAGA TCATCTTTGT CATCGCTCAC CGCCTAAGCA CAGTTGAAAA TGCCGACAAA
ATCGCAGTTT TAAGTGATGG CAAGATCATT GATAGTGGAA GCGACGAGGA GCTTAGCAAA
AGAAATGAAA TTTATGCAAA ACTTAAGGGC AAAGCCTTAG TTTAA
 
Protein sequence
MNNFGLKDVL KRFGPYFKDY IPHFIFAIIG MGLASGGTAV SAYLVEPVLN KIFVEKNEKL 
LYILPCAIIA IYVIKNIGTF MQAYFTAYIG QDTIRRFREK MVANLLNLDM DFFNEFRTGE
LISRTTNDID RIRSIVSSII PELTRESVTI IGLLCVVIYQ SPKLAFFALV VMPVAIYPIS
RLAKRMKKIS KQSQEKTSDI TSALSEIFTN IEIIKANNAQ EYEHSRFVDE NNKFFRLNLK
SVKIEQLVSP LMETIGSIGV AAVIIIGGKD VIDGHINMGA FFSFLTALFM LYTPLKRIVN
IYNKMQDAIA ASERTFFLMD KVSQIKDGQN ELNEEINLIK FNDVRLSYGD KEVLKGINLE
ANKSEFIALV GSSGGGKSSL MNLLMRFYDV NGGEILINGT NLKDIKIHSL RQNIGLVTQR
VYIFNDTVAK NVAYGREFNE DAVINALKLA NAYEFVSKLD NGINTILNEF GTNLSGGQRQ
RIAIARALYQ NPQILIFDEA TSALDNESEK EITKAINNLR SKKIIFVIAH RLSTVENADK
IAVLSDGKII DSGSDEELSK RNEIYAKLKG KALV