| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0100 |
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| Symbol | pabC |
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| ID | 5596303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1052747 |
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| End bp | 1054465 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640929607 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_001466898 |
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| Protein GI | 157164490 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0667384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AAAGAATAGT AATAGACCCT ATAACACGTA TCGAAGGGCA CTTAAGAATA
GAAGTCGTAG TTGATGAAAA CAACGTTGTC AAAGAGGCTT ACTCTGGCTC AACTCTTTGG
AGAGGCTTAG AGCAGATAGT AAAAAACAGA GACCCAAGAG ATGCTGGCTT TTTCATGCAA
AGAATTTGCG GTGTTTGCAC ATACTCACAC TACCGAGCAG GCATAGTCGC AGTTGAGGAC
GCCCTTGGCA TCAAGCCTCC GCTAAATGCT GAGCTAACTA GAACACTTAT GAACGCAGCT
TTATATCTTC ACGATCACAT CGTGCACTTT TATCAGCTTC ACGGCATGGA CTGGGCAGAT
GTCGTCTCTG CACTAAGCGC AGACGTGCAT AGGGCTAGCG AAGAGGCGTT TAAATACACA
AGCACGCCAT TTGCCACTGG AGCAGATAAG CTAAAAGAGG TAAAAGAGAG GGTTGAAGCC
TTTGTTAAAA AGGGTAACCT TGGACCATTT GCCAACGCAT ACTGGGGACA TAGCACATAT
AAATTTACTC CTGAGCAAAA TTTAATCGTC CTCTCTCACT ACTTAGAGTG CCTTAGAATT
CAAAGAACAG CAGCTCAGAT GATGGCTATC TTTGGCGCGA AAAACCCACA CCCGCAAAGC
CTAACTGTTG GTGGCGTGAC CTGCGTGATG GACCTGCTTG ATCCAGCCAG AATGGGCGAA
TATATGAGTA AATTTGCCGA GATAAAAGAA TTTGTTGATA GAGCTTACTA TCCAGATATC
TTGATGGCAG CTAAGGCTTA TGCAAACGAG CCGAGCGTTC TAAACGACGT TGGCGTATCA
AATTTATTCT GCTACGATGA GTTTTTGATC GGCAAAAATG ACCATCTATT TAAAGGCGGC
ATCATCTTAA ATGGTGATAT TAGCAAGGTT TATGATATCG ACGAAAACAA AATTACAGAA
GAGGCTACAA GATCTTGGTA TAAAAATGAC AAAGCACTTC ACCCATATGA CGGCGAGACA
GAGGCAAACT ACACTGGCCT TGTTGATGGC GAGAGCATAG ACGGCGAGGG CAAGCTGGCT
CACAGCAAGC TTTTTGACAC AAAGGGCAAA TATAGCTGGA TCAAAGCACC AAGATATGAT
GGCATGCCTA TGCAAGTAGG ACCGATCGCA AGCATCGTCA TAAACTACGC TAAAGGCAAC
GAGAGAGTTA AAAAGGTAGT CGATGAGTTT TTAGCAAAGA GTGGCTTGCC ACTAAGCGTA
GTCTTTTCAA CTCTAGGTAG AACCGCTGCT CGTATGCTTG AGGCAAAAGT GGTCGCAGAG
CACACAATGG ACGCATTTAA TGCCTTGATC GAAAATTTAA AGACAGATCA AGAGACTTGC
ACAAAATATG TAATAGATAA CAAAAAAGAA TATAAAGGAA ATTTTCAAGG CAACGCTCCA
AGAGGTGCCC TTAGCCACTG GTGCCGCATA AAAGATGGCG TCATCTCAAA CTGGCAAGCA
GTTGTGCCAA GCACTTGGAA CGCCTCTCCA AAAGATGCCA AAGGTCAAAT GGGAAGTTAC
GAGGCATGCT TAGTTGGTTT AAAGATCGCT GATCTTTCAA AACCACTTGA GATAATACGA
AAAATTCACT CTTACGATCC TTGCATCGCG TGTGCCGTGC ATGTTATGGA CACTAAGGGA
AATGATTTGA GTACTTATAA GATAAATCCA AATTTGTAA
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| Protein sequence | MSEKRIVIDP ITRIEGHLRI EVVVDENNVV KEAYSGSTLW RGLEQIVKNR DPRDAGFFMQ
RICGVCTYSH YRAGIVAVED ALGIKPPLNA ELTRTLMNAA LYLHDHIVHF YQLHGMDWAD
VVSALSADVH RASEEAFKYT STPFATGADK LKEVKERVEA FVKKGNLGPF ANAYWGHSTY
KFTPEQNLIV LSHYLECLRI QRTAAQMMAI FGAKNPHPQS LTVGGVTCVM DLLDPARMGE
YMSKFAEIKE FVDRAYYPDI LMAAKAYANE PSVLNDVGVS NLFCYDEFLI GKNDHLFKGG
IILNGDISKV YDIDENKITE EATRSWYKND KALHPYDGET EANYTGLVDG ESIDGEGKLA
HSKLFDTKGK YSWIKAPRYD GMPMQVGPIA SIVINYAKGN ERVKKVVDEF LAKSGLPLSV
VFSTLGRTAA RMLEAKVVAE HTMDAFNALI ENLKTDQETC TKYVIDNKKE YKGNFQGNAP
RGALSHWCRI KDGVISNWQA VVPSTWNASP KDAKGQMGSY EACLVGLKIA DLSKPLEIIR
KIHSYDPCIA CAVHVMDTKG NDLSTYKINP NL
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