Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0076 |
Symbol | |
ID | 5597190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1202027 |
End bp | 1203601 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640929763 |
Product | GGDEF domain-containing protein |
Protein accession | YP_001467045 |
Protein GI | 157165714 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.790276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAG TAACCGTTAG TCAAATAGTC AAGGAGGCCT TGAGCGAGAT AAAAGATCGC CATTTGATGC TAACGCCAGA AAATTACACC GAAGTTTATA ATGAAATTTC TAAAAAATAT GGCTTTACTA CCGAAGAGAG CAAAAAGATA GAAAAATATA TCTCAAGGCT TGGTGATGAC TACAAGGCGC AAGCTATAAG TCTTCATATA AAAACGGTTG ATGAGTTTGT AGCTTTTATG ACCGCTAGGC TCTCTCACGG TGCTAAAAAT GGCACAGCAC AAGTGGTCGA TGATAAAAAG TTAAAGTCAT TAAACGCCTT TGCAAGAAGA ATCCTCCAAG CCATCTCTAT GCTTCACAAC AAAGATGCAA AAGCCCTAGC AGAGCAAGGC ATGCAGCTAC TTGCTAGAAG ATATGATGAG AAAAATCTTG AAGAGATGTG CCTTAAATGG TTTGACTTTG TAAGCTCTTA CGATACTGAA TTTTTGGACT TTTTGAAATA TTACGGCGTG AGAGACTTTG ACGATCTAAA GACTATGAGC GCTGAGCTTG AGAAATTCTT ATCTCAAAAA AATGAAAGCG CAGAAGAAAA TGCTTTAGTT GAGCTTTTAA ATTTTGCCCT TGAGCCTTCT ATCACAAAGG AGCTTGGCGA GGAGCTTAGC ACCATTAGAA GCGTTTTAAA GCAAAATCCA CAAAGCCTAA ACAGCAAAGA ATTTCAAGAT AAGATAAAAG GTTTTGTTGA TCGCAGGATC GAAGAAGATA GAACCGAGAT CATCGAAAAA GTGGGCTCAT TAAACAACAT CTTGCAAAGC ATAGGCGAGA GGATTTCAGA TATCGCAGCT AGCTCAAAAA GTAGTTCGGC TAAGGTGCAA AGCATCAAAA ATGATCTTAA AAATGTAAAT TTAAATGCAA ATAGCATCGA TCATGTAAAG AGCATGCTTA TCGAGATCGC AGGTGCCTTG GAGATCGAGA GTAAGGAGCT TGGCCTTGAG ATGAACAGCA AGCAAGCTAC CATTTCTGAG CTTCAAAATA GGGTCACAAG CTTAGAAAAA GAGCTTGAAG CTGCTAAGCT TGAGAGCAAA GAGGACTTTT TGACAAAAGT GGCTACAAAA AGAGCTTTGA TGAGTGAAAT TCAGCGCATC GAAGAGGCTT ATAAACGTTA CGGCACGGAC TATTCGATCT GCTTTGTTGA TATTGATTTC TTTAAAAAGA TAAATGACAC CTACGGACAC GAAGCTGGCG ACGTTATCCT TTCAGCTGTG GCTCAAGTGC TTAAGAAAAA TGCTAGAAAG GTTGATTTTG TCGGTAGATA TGGCGGCGAG GAATTTGTCA TTTTGCTACC AAGTACGAGC CTAAAAGATG GTGTTAGATT TGGCGAGAAG CTAAGAAGCA TGATCGAAAA TTTCAAATTT ATCTATAAAA ACGAGCGTAT CAAAGTTACC ATTAGCTCTG GCGTGGCGAC AAGAAGTGCA AATTTAAGTG ATACGATGAC GCTTGAGGGT GCTGATAAGA TGCTCTATCT TTCAAAAGAG GGCGGCAGAA ACCAAGTCAT GCCAAAGATA ATCGAGGAAA AATGA
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Protein sequence | MAAVTVSQIV KEALSEIKDR HLMLTPENYT EVYNEISKKY GFTTEESKKI EKYISRLGDD YKAQAISLHI KTVDEFVAFM TARLSHGAKN GTAQVVDDKK LKSLNAFARR ILQAISMLHN KDAKALAEQG MQLLARRYDE KNLEEMCLKW FDFVSSYDTE FLDFLKYYGV RDFDDLKTMS AELEKFLSQK NESAEENALV ELLNFALEPS ITKELGEELS TIRSVLKQNP QSLNSKEFQD KIKGFVDRRI EEDRTEIIEK VGSLNNILQS IGERISDIAA SSKSSSAKVQ SIKNDLKNVN LNANSIDHVK SMLIEIAGAL EIESKELGLE MNSKQATISE LQNRVTSLEK ELEAAKLESK EDFLTKVATK RALMSEIQRI EEAYKRYGTD YSICFVDIDF FKKINDTYGH EAGDVILSAV AQVLKKNARK VDFVGRYGGE EFVILLPSTS LKDGVRFGEK LRSMIENFKF IYKNERIKVT ISSGVATRSA NLSDTMTLEG ADKMLYLSKE GGRNQVMPKI IEEK
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