Gene CCC13826_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0076 
Symbol 
ID5597190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1202027 
End bp1203601 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content40% 
IMG OID640929763 
ProductGGDEF domain-containing protein 
Protein accessionYP_001467045 
Protein GI157165714 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.790276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAG TAACCGTTAG TCAAATAGTC AAGGAGGCCT TGAGCGAGAT AAAAGATCGC 
CATTTGATGC TAACGCCAGA AAATTACACC GAAGTTTATA ATGAAATTTC TAAAAAATAT
GGCTTTACTA CCGAAGAGAG CAAAAAGATA GAAAAATATA TCTCAAGGCT TGGTGATGAC
TACAAGGCGC AAGCTATAAG TCTTCATATA AAAACGGTTG ATGAGTTTGT AGCTTTTATG
ACCGCTAGGC TCTCTCACGG TGCTAAAAAT GGCACAGCAC AAGTGGTCGA TGATAAAAAG
TTAAAGTCAT TAAACGCCTT TGCAAGAAGA ATCCTCCAAG CCATCTCTAT GCTTCACAAC
AAAGATGCAA AAGCCCTAGC AGAGCAAGGC ATGCAGCTAC TTGCTAGAAG ATATGATGAG
AAAAATCTTG AAGAGATGTG CCTTAAATGG TTTGACTTTG TAAGCTCTTA CGATACTGAA
TTTTTGGACT TTTTGAAATA TTACGGCGTG AGAGACTTTG ACGATCTAAA GACTATGAGC
GCTGAGCTTG AGAAATTCTT ATCTCAAAAA AATGAAAGCG CAGAAGAAAA TGCTTTAGTT
GAGCTTTTAA ATTTTGCCCT TGAGCCTTCT ATCACAAAGG AGCTTGGCGA GGAGCTTAGC
ACCATTAGAA GCGTTTTAAA GCAAAATCCA CAAAGCCTAA ACAGCAAAGA ATTTCAAGAT
AAGATAAAAG GTTTTGTTGA TCGCAGGATC GAAGAAGATA GAACCGAGAT CATCGAAAAA
GTGGGCTCAT TAAACAACAT CTTGCAAAGC ATAGGCGAGA GGATTTCAGA TATCGCAGCT
AGCTCAAAAA GTAGTTCGGC TAAGGTGCAA AGCATCAAAA ATGATCTTAA AAATGTAAAT
TTAAATGCAA ATAGCATCGA TCATGTAAAG AGCATGCTTA TCGAGATCGC AGGTGCCTTG
GAGATCGAGA GTAAGGAGCT TGGCCTTGAG ATGAACAGCA AGCAAGCTAC CATTTCTGAG
CTTCAAAATA GGGTCACAAG CTTAGAAAAA GAGCTTGAAG CTGCTAAGCT TGAGAGCAAA
GAGGACTTTT TGACAAAAGT GGCTACAAAA AGAGCTTTGA TGAGTGAAAT TCAGCGCATC
GAAGAGGCTT ATAAACGTTA CGGCACGGAC TATTCGATCT GCTTTGTTGA TATTGATTTC
TTTAAAAAGA TAAATGACAC CTACGGACAC GAAGCTGGCG ACGTTATCCT TTCAGCTGTG
GCTCAAGTGC TTAAGAAAAA TGCTAGAAAG GTTGATTTTG TCGGTAGATA TGGCGGCGAG
GAATTTGTCA TTTTGCTACC AAGTACGAGC CTAAAAGATG GTGTTAGATT TGGCGAGAAG
CTAAGAAGCA TGATCGAAAA TTTCAAATTT ATCTATAAAA ACGAGCGTAT CAAAGTTACC
ATTAGCTCTG GCGTGGCGAC AAGAAGTGCA AATTTAAGTG ATACGATGAC GCTTGAGGGT
GCTGATAAGA TGCTCTATCT TTCAAAAGAG GGCGGCAGAA ACCAAGTCAT GCCAAAGATA
ATCGAGGAAA AATGA
 
Protein sequence
MAAVTVSQIV KEALSEIKDR HLMLTPENYT EVYNEISKKY GFTTEESKKI EKYISRLGDD 
YKAQAISLHI KTVDEFVAFM TARLSHGAKN GTAQVVDDKK LKSLNAFARR ILQAISMLHN
KDAKALAEQG MQLLARRYDE KNLEEMCLKW FDFVSSYDTE FLDFLKYYGV RDFDDLKTMS
AELEKFLSQK NESAEENALV ELLNFALEPS ITKELGEELS TIRSVLKQNP QSLNSKEFQD
KIKGFVDRRI EEDRTEIIEK VGSLNNILQS IGERISDIAA SSKSSSAKVQ SIKNDLKNVN
LNANSIDHVK SMLIEIAGAL EIESKELGLE MNSKQATISE LQNRVTSLEK ELEAAKLESK
EDFLTKVATK RALMSEIQRI EEAYKRYGTD YSICFVDIDF FKKINDTYGH EAGDVILSAV
AQVLKKNARK VDFVGRYGGE EFVILLPSTS LKDGVRFGEK LRSMIENFKF IYKNERIKVT
ISSGVATRSA NLSDTMTLEG ADKMLYLSKE GGRNQVMPKI IEEK