Gene CCC13826_0060 details

Gene Information

• Locus tag: CCC13826_0060
• Symbol: smpB
• ID: 5596886
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 1219970
• End bp: 1220425
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640929779
• Product: SsrA-binding protein
• Protein accession: YP_001467061
• Protein GI: 157164927
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAAAAG ATCTAGCAAA AAACAAGAAA GCTTTGCATG ACTTTAGCAT ACTTGAGACC 
TTTGAAGCTG GCATCGTTTT AAAAGGTAGC GAGGTCAAGG CTCTAAGGGC TGGCAGAGCA 
AATTTAAAAG ATAGCTTTGT GCGCGTTATA AAGGGTGAGC TTTTCTTACT AAACGCCCAT 
ATCAGCTATC TTGAAACCAC ACACAGCGCA TTTCGTCCAA ATGAGCGAGC AGCCAGAAAA 
CTTTTGATGC ACAGAAAGCA GATCGATAAA ATTTTCGGTC AAGTCTCACA AGATGGGCTA 
GCTCTAGTTG TTCTAGCACT TTATCTAAGC GATAAAAACA TCGTAAAAGC AAGGCTGGCC 
CTTGCAAAAG GTAAAAATTT ACACGACAAG CGCGAGACTT TAAAAAGACG TGAGGCAGAC 
AAAGAAGCAA GAGCTGCCAT AAAAAGATAT GTTTAA 

 

Protein sequence

MIKDLAKNKK ALHDFSILET FEAGIVLKGS EVKALRAGRA NLKDSFVRVI KGELFLLNAH 
ISYLETTHSA FRPNERAARK LLMHRKQIDK IFGQVSQDGL ALVVLALYLS DKNIVKARLA 
LAKGKNLHDK RETLKRREAD KEARAAIKRY V