Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0035 |
Symbol | |
ID | 5596201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1241264 |
End bp | 1241749 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640929803 |
Product | 3-isopropylmalate dehydratase small subunit |
Protein accession | YP_001467085 |
Protein GI | 157164743 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02084] 3-isopropylmalate dehydratase, small subunit [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.158163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAG GCAAAGTTTG GAAATTTGGC GATAACATCG ACACCGACAT CATCATCGCC GCAAGATATT TAAACACTTC AGACGAAAAA GAGCTAGCAA AACACATCAT GGAAGACGCT GATCCTAAAT TTAGCTCAAA AATAGCAAAA GGCGACATCA TCGTAGCTGG CGAAAATTTT GGCTGCGGCA GCTCAAGAGA GCACGCCCCA CTAGCGCTAA AAGAGGCTGG CATAGCAGCT GTTGTGGCTA AGAGCTTTGC GAGGATTTTT TATAGAAATA GCTTTAACAC AGGGCTTTTG ATACTTGAGA TAAAAGAGAC TGATGAGATA AACGAGGGTG ACACGCTAAA GATCGACGTA GATAACGGCG TCATCATAAA TGAAAGCACA AAAAAAGAGT ATAAATTTAA CGCTATCCCG CCATTTATGC AAGAGCTTTT AAACGCTGGC GGCCTTATTG AATACGCAAA AGCGAAGATG AACTAA
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Protein sequence | MKQGKVWKFG DNIDTDIIIA ARYLNTSDEK ELAKHIMEDA DPKFSSKIAK GDIIVAGENF GCGSSREHAP LALKEAGIAA VVAKSFARIF YRNSFNTGLL ILEIKETDEI NEGDTLKIDV DNGVIINEST KKEYKFNAIP PFMQELLNAG GLIEYAKAKM N
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