| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0020 |
|---|
| Symbol | |
|---|
| ID | 5595582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1598360 |
|---|
| End bp | 1599571 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640930143 |
|---|
| Product | bacteriophage replication gene A protein |
|---|
| Protein accession | YP_001467420 |
|---|
| Protein GI | 157164506 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 232 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGTA TTAGCGAAAC TGATAAAATC TTTTTAAAGA ATAAGCTAGA AAATCAAAAG
AAATTTCTTG ATAGTAATTT CTTTATGATA AATGGCGAGT ATGTTCCTTA CTCTAACTTT
TATTTTTCTA GCTGGCATAA CTCAAACAGA TATATTGCTG AACTTAATAA CCGAGTAGCT
AGCCTTAATG ATTATGCTCT AAGTCAAGGA CTTTGTCCTA TTTTCGCAGT TTTTACCTTG
CCTAGTGAGT ATCATAAACA AAAACTTGTA ACCCTTAAGA GCGGTAAGAA AAAGCTTGTT
TATAATAAAA AGTTTATCGA TGATGAAGAT CATAGCGTTA GCGCAGGTGC TAGCAGGCTT
CAAGCTTTGG TTAGAAAAAT TATTGGTTCT CGATGTTTTA GGGGTATTGC TTCAGATAAA
AGATGCTACA TAACTACGAA AGAGCCGCAT TTAGATGGGA CTTGCCATTT AAATTTTCTT
GTTTTTGTTC CAAGAGAAAA ATTTAATGAT TGTGTTCGAG TTATTAAAGA TAATTTCTTA
GATACTCATA GCAGGGTTGA AACCGATATT AAAAACGCTA CTTCTTATGT TATGAAGTAT
ATTTTTAAAA CTCTTGATGA TTTACGTCAA AATCCAGATT TAGATAACTT GACCGATATT
AGCTATTGGT ATTTAAAGCA TAAAATTAGG CGTTTTACTA TGTCGCAAAC GTTTATTAGC
CTTGAAATTT ATAGAAAACT AAATGGCAGG GTTGATTTAA TATCTCTTAC AAAAAACTAC
AATAAAGGCT TGGTTACTGT TTTACTTGAT CCTGAAACTA AAAAGCCTTT ACAAATATTT
GATGAATTTG GCGATCTTTG GCATAAATTA AAGGTCTCAA AAGATGAGAC TACCATAAGA
TATCAAAACG TAAGTAGCGA GATAAAGGAC TTTGGCGATA CCTTAAAACA AAGGCAAATT
TTAAAAATTT GTGACGAGCT TTTTAAAGCT GAAAAGAAAG TTAAGCCAGT AAGTAAAATG
CGAGATTATG AGCTAGTTAA TTATTATCAA AGCTTGGGCG GTGATGTCAA TGTTCAACAT
TTGGCTTATG TTGAAAATTT AATGCTAGAT CGAAACTTAG ATAACTTTAC ACATTATCAC
GAAAGGCACG ATCTTAATGC CCCTGACATT TATAGCTTTG TAGATAGATT TTTGATTTGT
AATGAATTTT AA
|
|---|
| Protein sequence | MYGISETDKI FLKNKLENQK KFLDSNFFMI NGEYVPYSNF YFSSWHNSNR YIAELNNRVA
SLNDYALSQG LCPIFAVFTL PSEYHKQKLV TLKSGKKKLV YNKKFIDDED HSVSAGASRL
QALVRKIIGS RCFRGIASDK RCYITTKEPH LDGTCHLNFL VFVPREKFND CVRVIKDNFL
DTHSRVETDI KNATSYVMKY IFKTLDDLRQ NPDLDNLTDI SYWYLKHKIR RFTMSQTFIS
LEIYRKLNGR VDLISLTKNY NKGLVTVLLD PETKKPLQIF DEFGDLWHKL KVSKDETTIR
YQNVSSEIKD FGDTLKQRQI LKICDELFKA EKKVKPVSKM RDYELVNYYQ SLGGDVNVQH
LAYVENLMLD RNLDNFTHYH ERHDLNAPDI YSFVDRFLIC NEF
|
|---|
| |