| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0004 |
|---|
| Symbol | |
|---|
| ID | 5596848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1990379 |
|---|
| End bp | 1992028 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640930531 |
|---|
| Product | His kinase A |
|---|
| Protein accession | YP_001467796 |
|---|
| Protein GI | 157164739 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00729618 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATTA ATTTAAAATC ACAAAATATT AAAATTTATG CGATCATCTT GCTAGCAAGC
CTCTTTGTCG TGCTTCTTGG GCTAAACAGC TACAACAATG CAAAAGAAAA GATCATCGAG
CTATCTGATA AAAACAACAT CGCAGTTAGT AAAAACATCG TTAGCAACTT TCAAATTTGG
CTTGATGAGC GCTTAAATTC ACTCATCCGT GCGTCAAAAT TTATCCAAAA CTCTAACATC
ATAGATGACG ATACTAGAGT GGCAAATTTC ATAAAACTCT TTAAAGAAAA TGCAAAAGAA
TTTGATCTCA TGCAGCTTCT AAGAGAGGAT GGCGAGATCT TTGTAGATGG GCAAAAGATC
TCAGAAGAGG TGATGTCAAA GCGTGAGCGA GCGGGGCTTA TCTGGTATGT CGAGACAAAA
AATACAAATG CACCAAGCGT AAATTTCATG CAAAATCACA AAATTTTAAA GGACTCTACT
TTAAATTTAT GCGTGCCAGT TGAAAAAGAC GGGAAATTTG AAGCAGCACT TTGTGGCGTC
GTGCGCATAG GCACTATATT TGATAGCATC AAAAACTTTA GTCTTGCGCC AAATTCTTAC
TCATTTTTGG TAACTCACAG CGGTGAGATC CTCACATCGA TGGCTGATAT AACGCTCAAA
AGAGAGATCG AGGAGAAATT TAAAGAGATA TTTTTAAAAG ATGAGGACAT CACCAGCCTA
AAGATAGGGC AAAATTTGAT CCAAGTAGCC GAGATACCGA CGATGAACTG GTTTATCGGA
GCTGGCACAA ACAACGAAGA AGAAATTTTA GCCATGACAA GAGAGGCGCT AAAAAACGCC
CTAAATTTAC TCTTTGCCTT CGTCGCACTT GCATTCTTGG CAAACAGCCT GCACAACTTT
ATGTATAACA AGATAAAAAA GGTGCAAGAT GAGTATGAGA CCTTGCTAGC GCACAGAGCC
AAGATGAGCG AGGCTGGGGA GCTTATAAGT GGCATAAGTC ATCAGTTTAT CCAGCCAGTA
AATTCGCTAA AACTTATGCT AAGCTCGGCG ATAATGCTAA AAAAAGAGGG CAAGCTAAGT
GATGAGGAGC TTTTAAATTT ATTAAAAAAA GGGCAAAGCT CGATCGAGCT ACTATCAAAA
ACAATCGAAA TTTTTAGAAA TTTTTACAAA AGCGCTGAAA ATGTTAGCGA ATTTGACATC
CAAACAAGTG TTAGAAATTT AATAACACTT ATGCACACAG AGCTTAGCCG TGCAAATGTG
AGTGTGAAAT TTAGCGGATT TGAAGAGATG AAGGTCTGTC AGATAGAAAA CATCATCCAG
CAAATTTTGC TAATCCTAAT CCACAACGCA AAGGACTCAC TAGTTGAGAG CTACAAAGAT
GAGCCGCTAA AACGCGTGAT AGAGCTAAAA TTTAGAAGCT TTGAAGATAA GTGCTACATC
GGAGTTTATG ATAGTGGCGG CGGCGTGAGC TACGAGATGA GTAAGAAAAT TTTTACCTGG
CTAAACACGA CTAAAAAGCA AGGAAATGGC ATAGGACTTT ACTTTGCTAA AAAGCTCGCG
CGCGAGAAGC TAAATGGCGA CATCACGCTT GTGCACAACC TAAAGCCAAC GATTTTTGAG
CTAAGCTTTG ATAAGAATTT AAAGGGTTAA
|
|---|
| Protein sequence | MGINLKSQNI KIYAIILLAS LFVVLLGLNS YNNAKEKIIE LSDKNNIAVS KNIVSNFQIW
LDERLNSLIR ASKFIQNSNI IDDDTRVANF IKLFKENAKE FDLMQLLRED GEIFVDGQKI
SEEVMSKRER AGLIWYVETK NTNAPSVNFM QNHKILKDST LNLCVPVEKD GKFEAALCGV
VRIGTIFDSI KNFSLAPNSY SFLVTHSGEI LTSMADITLK REIEEKFKEI FLKDEDITSL
KIGQNLIQVA EIPTMNWFIG AGTNNEEEIL AMTREALKNA LNLLFAFVAL AFLANSLHNF
MYNKIKKVQD EYETLLAHRA KMSEAGELIS GISHQFIQPV NSLKLMLSSA IMLKKEGKLS
DEELLNLLKK GQSSIELLSK TIEIFRNFYK SAENVSEFDI QTSVRNLITL MHTELSRANV
SVKFSGFEEM KVCQIENIIQ QILLILIHNA KDSLVESYKD EPLKRVIELK FRSFEDKCYI
GVYDSGGGVS YEMSKKIFTW LNTTKKQGNG IGLYFAKKLA REKLNGDITL VHNLKPTIFE
LSFDKNLKG
|
|---|
| |