| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4921 |
|---|
| Symbol | |
|---|
| ID | 5586280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4909850 |
|---|
| End bp | 4911310 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640928522 |
|---|
| Product | mannitol dehydrogenase family protein |
|---|
| Protein accession | YP_001465849 |
|---|
| Protein GI | 157157003 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTA TTGTTGACAG CAATCTGCCG GTTGCCCGCC CGTCATGGGT GCATTCTCGT
CTGGAATCAC GCATTGTGCA TCTCGGTTGC GGGGCGTTTC ACCGCGCGCA CCAGGCGCTG
TATACCCATC ATCTGCTGGA AAGTACCGAC AGCGACTGGG GTATCTGCGA AGTTAACCTG
ATGCCAGGTA ACGACCGTGT GCTGATTGAA AACCTGAAAA AACAGCAACT GCTGTACACC
GTGGCGGAAA AAGGCGCGGA AAGCACCGAA CTGAAAATTA TCGGTTCGAT GAAAGAAGCG
CTGCATCCGG AAATCGACGG CTGCGAAGGT ATTCTCAACG CGATGGCGCG TCCGCAGACG
GCGATTGTCT CTCTGACGGT CACGGAAAAA GGCTACTGCG CTGATGCGGC AAGCGGTCAG
TTGGATCTCA ATAACCCGCT GATCAAGCAC GATCTGGAAA ACCCGACTGC GCCGAAGTCT
GCGATTGGTT ACATCGTCGA AGCCCTGCGT CTGCGTCGTG AAAAAGGGCT GAAAGCGTTT
ACGGTGATGT CCTGCGATAA CGTGCGTGAA AACGGTCATG TGGCGAAGGT CGCGGTACTG
GGGCTGGCTC AGGCGCGTGA CCCGCAGCTG GCGGCATGGA TTGAAGAGAA CGTCACCTTC
CCGTGCACCA TGGTTGACCG CATCGTTCCG GCGGCGACGC CAGAAACCTT ACAGGAAATT
GCTGACCAGC TGGGTGTTTA TGACCCGTGC GCCATTGCCT GCGAACCGTT CCGTCAGTGG
GTGATTGAAG ATAACTTCGT TAATGGTCGT CCGGACTGGG ATAAAGTGGG CGCACAGTTC
GTTGCAGACG TTGTGCCGTT CGAAATGATG AAGCTGCGTA TGCTGAACGG CAGCCACTCT
TTCCTGGCAT ACCTCGGTTA CCTCGGCGGC TATGAAACTA TTGCCGACAC CATGACTAAC
CCGGATTATC GCAAAGCGGC CTTTGCCCTG ATGATGCAGG AACAAGCGCC AACGCTGTCG
ATGCCGGAAG GTACGGACCT GAACGCCTAT GCGACGCTGC TGATCGAGCG TTTCAGCAAC
CCGTCTCTGC GTCACCGTAC CTGGCAGATT GCGATGGACG GCAGCCAGAA GTTACCGCAG
CGTCTGCTGG ATCCGGTGCG TCTGCACCTG CAAAACGGCG GCAGCTGGCG TCACCTGGCG
CTGGGCGTGG CTGGCTGGAT GCGTTACACC CAGGGCGTGG ATGAGCAGGG TAATGCCATT
GACGTGGTCG ACCCGATGCT GGCCGAGTTC CAGAAGATTA ACGCGCAGTA TCAGGGCGCA
GACCGCGTGA AAGCGCTGCT GGGCCTGAGC GGTATTTTTG CCGATGATCT GCCGCAGAAT
GCCGACTTTG TTGGCGCGGT GACGGCGGCA TATCAGCAGC TGTGCGAACG CGGTGCGCGC
GAGTGTGTGG CTGCGCTGTA A
|
|---|
| Protein sequence | MTTIVDSNLP VARPSWVHSR LESRIVHLGC GAFHRAHQAL YTHHLLESTD SDWGICEVNL
MPGNDRVLIE NLKKQQLLYT VAEKGAESTE LKIIGSMKEA LHPEIDGCEG ILNAMARPQT
AIVSLTVTEK GYCADAASGQ LDLNNPLIKH DLENPTAPKS AIGYIVEALR LRREKGLKAF
TVMSCDNVRE NGHVAKVAVL GLAQARDPQL AAWIEENVTF PCTMVDRIVP AATPETLQEI
ADQLGVYDPC AIACEPFRQW VIEDNFVNGR PDWDKVGAQF VADVVPFEMM KLRMLNGSHS
FLAYLGYLGG YETIADTMTN PDYRKAAFAL MMQEQAPTLS MPEGTDLNAY ATLLIERFSN
PSLRHRTWQI AMDGSQKLPQ RLLDPVRLHL QNGGSWRHLA LGVAGWMRYT QGVDEQGNAI
DVVDPMLAEF QKINAQYQGA DRVKALLGLS GIFADDLPQN ADFVGAVTAA YQQLCERGAR
ECVAAL
|
|---|
| |