Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4855 |
Symbol | |
ID | 5587078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4846876 |
End bp | 4847697 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640928461 |
Product | polysaccharide deacetylase family protein |
Protein accession | YP_001465788 |
Protein GI | 157158531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTAAAG CAAATCATGT TCCGGTATTA ATGTATCATC ATGTCAGCCA TTGCCCAGGA CTGGTTACAC TTTCTCCCGA GACATTCCGG AAACAAATGA AATGGTTGGC TGAAAACAAC TGGAAAACAC TGTCATCAGA TGAACTGGAG TTTTTTTATC GGGGCGGAAA ACTTCCCCGT AAAAGCGTTA TGTTGACATT TGATGATGGA TACCTTGACA ACTGGTTTCA GGTATATCCT TTATTAAACG AGTTTAATCT CAAGGCACAT ATTTTTTTAA TTACCAGTTT TATTGGAAAT GGTCCGGTTC GTCACTCTCC TGGAAAGGAA TATTCTCATC GCGATTGCGA ACATCAAATA GCAACCGGGA ATGCTGATAA TGTTATGCTT CGCTGGTCTG AAGTGAACGA AATGTTGCAA TCTGGTCTGG TCGAATTTCA TGTTCATACA CATACTCATA CACGTTGGGA TAAAAAGTTC ACTTCACGAG AAGAACAGTG TAAACATCTT CGGCAGGACT TATTGAGCGG GAGAGAATAT TTAAAAAATA TGACAGGAAA ATGCAGTAAA CATTTGTGTT GGCCGGAAGG TTATTATAAC AAGGATTATA TTCAGATCGC TGAAGAACTT GGATTCCATT ATTTATATAC AACAGAAAGA AGAATGAATG CTCCTGCTAA AGGAACTACA CGGATAGGAA GAATAAGCAC CAAGGAACGG GAAAATTGCG TATGGCTGAA AAGACGACTT TTTTATTATA CAACACCGTT TTTTTCATCG TTGCTGGCCC TTCATAAGGG GCCAAGATTA CCGGATGACT AA
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Protein sequence | MFKANHVPVL MYHHVSHCPG LVTLSPETFR KQMKWLAENN WKTLSSDELE FFYRGGKLPR KSVMLTFDDG YLDNWFQVYP LLNEFNLKAH IFLITSFIGN GPVRHSPGKE YSHRDCEHQI ATGNADNVML RWSEVNEMLQ SGLVEFHVHT HTHTRWDKKF TSREEQCKHL RQDLLSGREY LKNMTGKCSK HLCWPEGYYN KDYIQIAEEL GFHYLYTTER RMNAPAKGTT RIGRISTKER ENCVWLKRRL FYYTTPFFSS LLALHKGPRL PDD
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