| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4841 |
|---|
| Symbol | |
|---|
| ID | 5587569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 4833844 |
|---|
| End bp | 4835352 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640928448 |
|---|
| Product | group II intron-encoded reverse transcriptase/maturase |
|---|
| Protein accession | YP_001465775 |
|---|
| Protein GI | 157157242 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.266304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCA AGCTTGCCAC ATGGGCAGCC ACCGATCCGT CCCTACGGAT TCAACGGCTG
CTGCGTCTGA TAACACAACC AGAATGGCTG GCTGAAGCGG CGCGGATCAC GCTTTCATCA
AAGGGGGCCC ATACCCCCGG CGTTGATGGC GTGAACAAAA CAATGCTACA GGCCAGACTG
GCTGTTGAGC TGCAAATCCT CAGGGATGAA TTACTCTCAG GCCACTACCA GCCCTTGCCC
GCCAGACGGG TTTACATCCC TAAAAGCAAC GGCAAACTGC GACCACTGGG TATCCCCGCG
TTGCGGGATC GTATTGTTCA GCGGGCCATG CTGATGGCGA TGGAGCCGAT ATGGGAGAGT
GATTTTCATA CGCTCTCATA TGGCTTCCGG CCTGAGCGCA GTGTCCACCA CGCGATCCGC
ACGGTGAAAT TACAGCTCAC AGACTGTGGT GAAACCCGGG GACGCTGGGT GATTGAAGGC
GACCTGTCCA GTTACTTCGA CACCGTACAT CATCGACTGC TGATGAAGGC TGTACGCCGC
AGGATCAGTG ACGCACGTTT CATGACTCTG CTGTGGAAAA CCATCAAGGC GGGACATATC
GATGTCGGTC TCTTTCGGGC GGCCAGTGAA GGTGTGCCAC AGGGCGGTGT TATATCGCCG
CTATTATCGA ACATCATGCT GAATGAGTTC GATCAATACC TGCATGAGCG CTACCTGAGC
GGGAAAGCCA GAAAAGATCG GTGGTACTGG AATAACAGTA TCCAACGGGG CCGAAGTACG
GCGGTCAGAG AAAACTGGCA GTGGAAACCC GCGGTGGCGT ACTGCCGCTA TGCCGATGAT
TTTGTCCTCA TCGTCAAAGG CACCAAAGCA CAGGCGGAAG CCATCAGGGA GGAGTGTCGG
GGTGTGCTCG AAGGCAGTCT GAAACTCAGG CTGAACATGG ATAAGACTAA AATCACCCAT
GTTAATGACG GCTTTATCTT TCTGGGGCAC AGGATCATTC GCAAACGCAG TCGTTATGGC
GAGATGCGAG TGGTCTCAAC GATCCCGCAG GAGAAAGCCA GAAACTTCGC CGCATCGCTG
ACAGCACTGT TATCAGGCAA CTACAGTGAA AGCAAAGTCG ATATGGCTGA ACAACTCAAC
CGAAAACTGA AAGGCTGGGC CATGTTCTAT CAGTTCGTTG ATTTTAAGGC CAAAGTCTTC
AGTTATATCG ACCGTGTCGT GTTCTGGAAG CTGGCTCACT GGCTGGCCCG CAAATACCGT
ACAGGTATCG CTTCCCTGAT GAGGTGGTGG TGTAAATCAC CGAAACCGGG TCAGAGCAAA
ACGTGGGTTT TATTTGGTAA AACCAATCAC GGCAAGCTCA GCGGCGAAAT ACTGTACCGG
TTGGTGGGGC AAGGCAAGAA GCTGTTCCGC TGGCGGCTAC CCGAAGGTAA TCCCTATCTG
AGGACGGAGA CCAGAAACAC GTATACATCG CGCTTTACAG AAGTGGCAAT GGCGTTCGAC
AGCATTTAA
|
|---|
| Protein sequence | MQRKLATWAA TDPSLRIQRL LRLITQPEWL AEAARITLSS KGAHTPGVDG VNKTMLQARL
AVELQILRDE LLSGHYQPLP ARRVYIPKSN GKLRPLGIPA LRDRIVQRAM LMAMEPIWES
DFHTLSYGFR PERSVHHAIR TVKLQLTDCG ETRGRWVIEG DLSSYFDTVH HRLLMKAVRR
RISDARFMTL LWKTIKAGHI DVGLFRAASE GVPQGGVISP LLSNIMLNEF DQYLHERYLS
GKARKDRWYW NNSIQRGRST AVRENWQWKP AVAYCRYADD FVLIVKGTKA QAEAIREECR
GVLEGSLKLR LNMDKTKITH VNDGFIFLGH RIIRKRSRYG EMRVVSTIPQ EKARNFAASL
TALLSGNYSE SKVDMAEQLN RKLKGWAMFY QFVDFKAKVF SYIDRVVFWK LAHWLARKYR
TGIASLMRWW CKSPKPGQSK TWVLFGKTNH GKLSGEILYR LVGQGKKLFR WRLPEGNPYL
RTETRNTYTS RFTEVAMAFD SI
|
|---|
| |