Gene EcE24377A_4818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4818 
SymbolpyrB 
ID5590325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4812018 
End bp4812953 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content54% 
IMG OID640928428 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001465756 
Protein GI157157005 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATC CGCTATATCA GAAACATATC ATTTCCATAA ACGACCTTAG TCGCGATGAC 
CTTAATCTGG TGCTGGCGAC AGCGGCGAAA CTGAAAGCAA ACCCGCAACC AGAGCTGTTG
AAGCACAAAG TCATTGCCAG CTGTTTCTTC GAAGCCTCTA CCCGTACCCG CCTCTCTTTC
GAAACATCTA TGCACCGCCT GGGTGCCAGC GTGGTGGGCT TCTCCGACAG CGCCAATACA
TCACTGGGTA AAAAGGGCGA AACGCTGGCC GATACCATTT CGGTTATCAG CACTTACGTC
GATGCGATAG TGATGCGTCA TCCGCAGGAA GGTGCGGCGC GCCTGGCCAC CGAGTTTTCC
GGCAATGTAC CGGTACTGAA TGCCGGTGAT GGCTCCAACC AACATCCGAC GCAAACCTTG
CTGGACTTAT TCACTATTCA GGAAACCCAG GGGCGTCTGG ACAATCTCCA CGTCGCAATG
GTTGGTGACC TGAAATATGG CCGCACCGTT CACTCCCTGA CTCAGGCGTT AGCGAAGTTC
GACGGCAACC GTTTTTACTT CATCGCGCCG GACGCGCTGG CAATGCCGCA ATACATTCTG
GATATGCTCG ATGAAAAAGG GATCGCATGG AGTCTGCACA GCTCTATTGA AGAAGTGATG
GCGGAAGTAG ACATCCTGTA CATGACCCGC GTGCAAAAAG AGCGTCTGGA CCCGTCCGAG
TACGCCAACG TGAAAGCGCA GTTTGTTCTT CGCGCCAGCG ATCTCCACAA CGCCAAAGCC
AATATGAAAG TGCTGCATCC GCTGCCGCGT GTTGATGAGA TTGCGACGGA TGTTGATAAA
ACGCCACACG CCTGGTACTT CCAGCAGGCA GGCAACGGGA TTTTCGCTCG CCAGGCGTTA
CTGGCACTGG TTCTGAATCG CGATCTGGTA CTGTAA
 
Protein sequence
MANPLYQKHI ISINDLSRDD LNLVLATAAK LKANPQPELL KHKVIASCFF EASTRTRLSF 
ETSMHRLGAS VVGFSDSANT SLGKKGETLA DTISVISTYV DAIVMRHPQE GAARLATEFS
GNVPVLNAGD GSNQHPTQTL LDLFTIQETQ GRLDNLHVAM VGDLKYGRTV HSLTQALAKF
DGNRFYFIAP DALAMPQYIL DMLDEKGIAW SLHSSIEEVM AEVDILYMTR VQKERLDPSE
YANVKAQFVL RASDLHNAKA NMKVLHPLPR VDEIATDVDK TPHAWYFQQA GNGIFARQAL
LALVLNRDLV L