| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4813 |
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| Symbol | treR |
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| ID | 5586116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 4805578 |
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| End bp | 4806525 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640928423 |
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| Product | trehalose repressor |
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| Protein accession | YP_001465751 |
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| Protein GI | 157158377 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC GGCTGACCAT CAAAGACATC GCACGCTTAA GCGGCGTGGG GAAATCTACA
GTTTCCCGGG TGCTGAATAA CGAAAGCGGC GTGAGCCAGC GCACCCGCGA GCGTGTTGAA
GCAGTGATGA ATCAGCATGG ATTTTCCCCT TCCCGCTCTG CGCGCGCTAT GCGTGGGCAA
AGCGATAAAG TGGTCGCCAT CATTGTTACC CGCCTGGATT CGTTGTCAGA AAATCTCGCC
GTTCAAACCA TGCTGCCAGC GTTCTATGAA CAAGGTTACG ACCCAATCAT GATGGAAAGT
CAGTTTTCCC CGCAATTAGT TGCCGAACAT TTGGGGGTGC TGAAACGGCG TAATATCGAC
GGCGTAGTGC TGTTCGGTTT TACTGGCATA ACAGAAGAAA TGTTAGCCCA CTGGCAGTCA
TCGCTGGTTC TGCTGGCGCG TGACGCAAAA GGTTTTGCTT CGGTCTGTTA TGACGACGAA
GGGGCAATCA AGATCCTGAT GCAACGGCTG TATGACCAGG GGCATCGTAA TATCAGTTAT
CTCGGCGTGC CGCATAGTGA CGTGACGACC GGGAAGCGAC GTCACGAAGC CTACCTGGCG
TTCTGCAAAG CGCATAAACT GAATCCCGTT GCCGCTCTGC CAGGCCTTGC TATGAAGCAA
GGCTATGAGA ACGTAGCAAA AGTGATTACG CCTGAAACTA CCGCCTTACT GTGCGCAACC
GACACGCTGG CACTTGGCGC AAGTAAATAC CTGCAAGAGC AACGCATCGA CACCTTGCAA
CTGGCGAGCG TCGGTAATAC GCCATTAATG AAATTCCTTC ATCCGGAGAT CGTCACCGTA
GATCCTGGTT ACGCCGAAGC TGGACGCCAG GCGGCCTGCC AATTGATCGC ACAGGTAACC
GGGCGCAGCG AACCGCAACA AATCATCATC CCCGCCACCC TGTCCTGA
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| Protein sequence | MQNRLTIKDI ARLSGVGKST VSRVLNNESG VSQRTRERVE AVMNQHGFSP SRSARAMRGQ
SDKVVAIIVT RLDSLSENLA VQTMLPAFYE QGYDPIMMES QFSPQLVAEH LGVLKRRNID
GVVLFGFTGI TEEMLAHWQS SLVLLARDAK GFASVCYDDE GAIKILMQRL YDQGHRNISY
LGVPHSDVTT GKRRHEAYLA FCKAHKLNPV AALPGLAMKQ GYENVAKVIT PETTALLCAT
DTLALGASKY LQEQRIDTLQ LASVGNTPLM KFLHPEIVTV DPGYAEAGRQ AACQLIAQVT
GRSEPQQIII PATLS
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