| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4805 |
|---|
| Symbol | pmbA |
|---|
| ID | 5587661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4797224 |
|---|
| End bp | 4798564 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640928415 |
|---|
| Product | peptidase PmbA |
|---|
| Protein accession | YP_001465743 |
|---|
| Protein GI | 157159292 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA TCTCTCAAGT TGAAGCGCAG CGCAAGATTC TGGAAGAAGC AGTTTCCACT
GCGCTGGAGT TGGCCTCAGG CAAATCGGAC GGTGCGGAAG TTGCCGTCAG CAAGACCACC
GGCATTAGCG TAAGCACGCG TTATGGTGAA GTGGAGAATG TTGAATTCAA TAGCGATGGC
GCGCTGGGGA TCACTGTTTA TCACCAGAAC CGCAAAGGTA GCGCATCATC CACCGATTTA
AGCCCGCAGG CCATTGCCCG TACTGTACAG GCGGCGCTGG ATATTGCCCG TTATACCTCG
CCAGATCCCT GTGCCGGCGT GGCAGACAAA GAGCTGCTGG CCTTTGACGC ACCAGATCTC
GACTTGTTCC ACCCTGCGGA AGTTTCCCCG GATGAAGCCA TTGAACTGGC GGCCCGCGCA
GAACAGGCGG CATTGCAGGC GGACAAACGC ATTACCAATA CCGAAGGTGG CAGCTTTAAC
AGCCACTACG GTGTCAAAGT TTTTGGCAAC AGCCACGGCA TGTTGCAGGG TTACTGCTCA
ACGCGTCATT CGCTCTCCAG CTGTGTAATT GCCGAAGAAA ATGGCGATAT GGAGCGTGAT
TACGCCTACA CCATTGGCCG CGCGATGAGC GATCTGCAAA CGCCAGAGTG GGTCGGGGCC
GACTGCGCTC GCCGTACTTT ATCGCGCCTG TCACCGCGTA AACTCTCCAC CATGAAAGCG
CCAGTCATTT TTGCCAATGA AGTGGCAACC GGGCTTTTTG GCCATCTGGT GGGGGCGATA
GCGGGTGGCT CGGTTTACCG TAAATCTACC TTTCTGCTGG ATTCGCTGGG TAAACAAATT
CTGCCGGACT GGCTGACCAT TGAAGAGCAT CCGCATCTGC TGAAAGGGCT GGCGTCGACG
CCATTCGACA GCGAAGGTGT GCGCACCGAG CGTCGCGATA TTATTAAAGA TGGCATCCTG
ACTCAGTGGC TGCTGACCAG CTACTCGGCG CGGAAACTGG GGCTGAAAAG CACCGGACAT
GCGGGCGGTA TTCACAACTG GCGGATTGCC GGACAAGGGC TAAGCTTCGA ACAAATGCTC
AAAGAGATGG GCACCGGGCT GGTGGTGACG GAGCTGATGG GCCAGGGCGT GAGTGCCATT
ACCGGTGATT ATTCCCGTGG TGCAGCGGGC TTCTGGGTAG AGAATGGCGA AATTCAGTAT
CCCGTTAGTG AAATCACCAT CGCAGGTAAT TTAAAAGATA TGTGGCGCAA TATTGTCACC
GTCGGTAACG ATATTGAAAC ACGCAGTAAT ATACAGTGTG GTTCTGTGCT GTTGCCGGAG
ATGAAAATCG CCGGGCAGTA A
|
|---|
| Protein sequence | MKVISQVEAQ RKILEEAVST ALELASGKSD GAEVAVSKTT GISVSTRYGE VENVEFNSDG
ALGITVYHQN RKGSASSTDL SPQAIARTVQ AALDIARYTS PDPCAGVADK ELLAFDAPDL
DLFHPAEVSP DEAIELAARA EQAALQADKR ITNTEGGSFN SHYGVKVFGN SHGMLQGYCS
TRHSLSSCVI AEENGDMERD YAYTIGRAMS DLQTPEWVGA DCARRTLSRL SPRKLSTMKA
PVIFANEVAT GLFGHLVGAI AGGSVYRKST FLLDSLGKQI LPDWLTIEEH PHLLKGLAST
PFDSEGVRTE RRDIIKDGIL TQWLLTSYSA RKLGLKSTGH AGGIHNWRIA GQGLSFEQML
KEMGTGLVVT ELMGQGVSAI TGDYSRGAAG FWVENGEIQY PVSEITIAGN LKDMWRNIVT
VGNDIETRSN IQCGSVLLPE MKIAGQ
|
|---|
| |