| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4800 |
|---|
| Symbol | |
|---|
| ID | 5589488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 4792841 |
|---|
| End bp | 4793836 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640928410 |
|---|
| Product | inner membrane ABC transporter permease protein YjfF |
|---|
| Protein accession | YP_001465738 |
|---|
| Protein GI | 157156783 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAC GTAACTTGCC GCTGATGATC ACCATCGGTG TCTTTGTGCT GGGCTATCTC
TACTGCCTGA CCCAGTTTCC CGGTTTTGCT TCCACAAGAG TGATCTGCAA TATCCTGACC
GATAACGCCT TTCTTGGGAT AATCGCCGTT GGCATGACCT TTGTGATCCT CTCTGGCGGT
ATCGATCTCT CCGTCGGTTC GGTGATCGCC TTTACTGGCG TGTTTCTGGC AAAAGTGATT
GGCGATTTCG GCCTCTCGCC GCTGCTGGCG TTTCCGCTAG TGCTGGTGAT GGGCTGTGCC
TTTGGCGCAT TTATGGGGCT TTTGATCGAC GCCCTGAAGA TCCCGGCATT TATCATTACC
CTGGCAGGAA TGTTCTTTTT GCGCGGCGTC AGCTATCTCG TTTCAGAAGA GTCGATCCCG
ATAAACCATC CCATTTATGA CACGCTCTCA AGCCTTGCGT GGAAAATCCC TGGCGGCGGT
CGCTTAAGTG CGATGGGACT GCTGATGCTG GCGGTGGTGG TTATCGGCAT ATTCCTCGCG
CATCGTACCC GTTTTGGTAA TCAGGTATAC GCCATTGGCG GCAACGCAAC GTCGGCAAAC
CTGATGGGGA TTTCTACCCG CAGCACCACT ATTCGCATTT ATATGCTCTC CACCGGACTG
GCAACGCTGG CGGGGATTGT CTTCTCGATT TATACCCAGG CCGGATATGC GCTGGCGGGC
GTAGGTGTGG AACTGGATGC TATCGCCTCA GTGGTAATTG GCGGTACGCT TTTGAGCGGT
GGCGTTGGAA CGGTATTAGG GACGCTTTTT GGCGTGGCGA TTCAGGGGCT AATTCAGACT
TATATCAACT TTGACGGTAC GCTGAGTTCC TGGTGGACGA AAATCGCCAT CGGCATTTTG
CTGTTCATTT TTATTGCCTT ACAGCGTGGA TTAACGGTGC TGTGGGAGAA TCGTCAGAGT
TCGCCAGTGA CAAGAGTCAA TATTGCGCAG CGATAA
|
|---|
| Protein sequence | MIKRNLPLMI TIGVFVLGYL YCLTQFPGFA STRVICNILT DNAFLGIIAV GMTFVILSGG
IDLSVGSVIA FTGVFLAKVI GDFGLSPLLA FPLVLVMGCA FGAFMGLLID ALKIPAFIIT
LAGMFFLRGV SYLVSEESIP INHPIYDTLS SLAWKIPGGG RLSAMGLLML AVVVIGIFLA
HRTRFGNQVY AIGGNATSAN LMGISTRSTT IRIYMLSTGL ATLAGIVFSI YTQAGYALAG
VGVELDAIAS VVIGGTLLSG GVGTVLGTLF GVAIQGLIQT YINFDGTLSS WWTKIAIGIL
LFIFIALQRG LTVLWENRQS SPVTRVNIAQ R
|
|---|
| |