Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4766 |
Symbol | |
ID | 5587508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4759817 |
End bp | 4761118 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640928377 |
Product | TRAP transporter, DctM subunit |
Protein accession | YP_001465705 |
Protein GI | 157159334 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.428747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACT GGTTACCGAT TATTGTGTTA TTTGGTGCCT TCTTTTTTAT GTTGGCATTA GGTGTACCTA TTGTTTATGC CATTGGTTTA TCGACACTGG CATCAATTTC CACACAACTC GATTTCAACT CAGCATTGAG TGTGGTTTCC CAAAAGTTAG CCTCCGGGTT AGATAGTTTT ACGTTGTTGG CAATCCCATT TTTTATCTTG TCTGGCAACA TTATGAATCA TGGAGGAATA GCGCGACGAT TAATCAACTT TGCCCGTATT CTCGGCGGTC GTCTGCCAGG CTCACTTGCC CACTGTAATA TTCTCGCCAA TATGCTGTTC GGGGCAATTT CTGGTTCAGC CGTGGCTTCG GCGGCTGCGA TGGGCGGCGT CATGCATCCG CAACAGGTTA AAGAGGGCTA CGACCCGGCA TTCAGTACTG CGGTTAACGT TGCCTCTGCC CCGACGGGTT TGCTTATTCC ACCAAGTAAT ACGTTAATCG TCTATTCACT GGTCAGTGGT GGTACTTCTA TTGCCGCACT GTTCCTGGCG GGTTATGTTC CGGGGATTTT GCTGGGTCTG GCACTGATGG TAATAGCCGG TATTATCGCT GTACGTCGCG GTTATCCAAA ACCAGAACGT CCGACTTTGC GCCAGGCTGG CGTTGCGATA TGGATGGCTA TCCCCAGTAT TTTCCTGATT GTGTTAATTA TGGGTGGCGT ACTAAGCGGT ATTTTTACTC CAACCGAAGC CTCCGCAATT GCGGTAATTT ATACCCTTTT CCTTGCACTG GTTCTTTATC GTGAAATCTC AGTTAAAGAT TTACCTAAAA TATTTCTGGA ATCCGTTATT ACCACTGCAA TTGTCTTGTT ATTAATTGGT TCTTCGATGG GAATGTCATG GGCAATGTCA AACGCTGACG TTCCCTTCCT GATTCTCGAT TTGCTTAACA CTATTTCTGA CAACCCAATA ATAATCCTGC TTATTATCAA TATTATCCTG TTGATTATCG GCACTTTTAT GGATATGACA CCGGCGGTAC TGATTTTTAC GCCGATATTT TTACCGGTTG TCACCGAACT GGGCATGGAC CCGATTCACT TTGGTATTGT CATGGTGCTG AACATGTGTA TCGGTATTTG TACTCCGCCT GTAGGCAGTG TGTTATTTGT CGGTTGTAGT GTATCTAAAT TACCGATTAA TAAAATTATC AAACCTATGC TGCCATTCTA TGCCGTGATG GTATTGGTGC TGGCAATGGT GACCTATATT CCGCAAATCA GTATGGCATT GCCAAGAGCA CTGGGTTACT GA
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Protein sequence | MDYWLPIIVL FGAFFFMLAL GVPIVYAIGL STLASISTQL DFNSALSVVS QKLASGLDSF TLLAIPFFIL SGNIMNHGGI ARRLINFARI LGGRLPGSLA HCNILANMLF GAISGSAVAS AAAMGGVMHP QQVKEGYDPA FSTAVNVASA PTGLLIPPSN TLIVYSLVSG GTSIAALFLA GYVPGILLGL ALMVIAGIIA VRRGYPKPER PTLRQAGVAI WMAIPSIFLI VLIMGGVLSG IFTPTEASAI AVIYTLFLAL VLYREISVKD LPKIFLESVI TTAIVLLLIG SSMGMSWAMS NADVPFLILD LLNTISDNPI IILLIINIIL LIIGTFMDMT PAVLIFTPIF LPVVTELGMD PIHFGIVMVL NMCIGICTPP VGSVLFVGCS VSKLPINKII KPMLPFYAVM VLVLAMVTYI PQISMALPRA LGY
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