Gene EcE24377A_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4687 
SymbolcadB 
ID5588715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4690098 
End bp4691432 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content50% 
IMG OID640928299 
Productlysine/cadaverine antiporter 
Protein accessionYP_001465631 
Protein GI157156063 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCTG CCAAGAAGAT CGGGCTATTT GCCTGTACCG GTGTTGTTGC CGGTAATATG 
ATGGGGAGCG GTATTGCATT ATTACCTGCG AACCTAGCAA GTATCGGTGG TATTGCTATC
TGGGGTTGGA TTATCTCTAT TATTGGTGCA ATGTCGCTGG CGTATGTATA TGCCCGACTG
GCAACAAAAA ACCCGCAACA AGGTGGCCCA ATTGCTTATG CCGGAGAAAT TTCCCCTGCA
TTTGGTTTTC AGACAGGTGT TCTTTATTAC CATGCTAACT GGATTGGTAA CCTGGCGATT
GGTATTACCG CGGTATCTTA TCTTTCCACC TTCTTCCCAG TATTAAATGA TCCTGTTCCG
GCGGGTATCG CCTGTATTGC TATCGTCTGG GTATTTACCT TTGTAAATAT GCTCGGCGGT
ACCTGGGTAA GCCGTTTAAC CACTATTGGT CTGGTGCTGG TTCTTATTCC TGTGGTGATG
ACTGCTATTG TTGGCTGGCA TTGGTTTGAT GCGGCAACTT ATGCAGCTAA CTGGAATACT
GCGGATACCA CTGATGGTCA TGCGATCATT AAAAGTATTC TGCTCTGCCT GTGGGCCTTC
GTGGGTGTTG AATCCGCAGC AGTAAGTACT GGTATGGTTA AAAACCCGAA ACGTACCGTT
CCGCTGGCAA CCATGCTGGG TACTGGTTTA GCAGGTATTG TTTACATCGC TGCGACTCAG
GTGCTTTCCG GTATGTATCC ATCTTCTGTA ATGGCAGCTT CCGGTGCTCC GTTTGCAATC
AGTGCTTCAA CCATCCTCGG TAACTGGGCT GCGCCGCTGG TTTCTGCATT CACCGCCTTT
GCGTGCCTGA CTTCTCTGGG CTCCTGGATG ATGTTGGTAG GCCAGGCAGG TGTACGTGCC
GCTAACGACG GTAACTTCCC GAAAGTTTAT GGTGAAGTCG ACAGCAACGG TATTCCGAAA
AAAGGTCTGC TGCTGGCTGC AGTGAAAATG ACTGCCCTGA TGATCCTCAT CACTCTGATG
AACTCTGCCG GTGGTAAAGC ATCTGACCTG TTCGGTGAAC TGACCGGTAT CGCAGTACTG
CTGACTATGC TGCCGTACTT CTACTCTTGC GTTGACCTGA TTCGTTTTGA AGGCGTTAAC
ATCCGCAACT TTGTCAGCCT GATCTGCTCT GTACTGGGTT GTGTGTTCTG CTTCATCGCG
CTGATGGGCG CAAGCTCCTT CGAGCTGGCA GGTACCTTCA TCGTCAGCCT GATTATCCTG
ATGTTCTACG CTCGCAAAAT GCACGAGCGC CAGAGCCACT CAATGGATAA CCACACCGCG
TCTAACGCAC ATTAA
 
Protein sequence
MSSAKKIGLF ACTGVVAGNM MGSGIALLPA NLASIGGIAI WGWIISIIGA MSLAYVYARL 
ATKNPQQGGP IAYAGEISPA FGFQTGVLYY HANWIGNLAI GITAVSYLST FFPVLNDPVP
AGIACIAIVW VFTFVNMLGG TWVSRLTTIG LVLVLIPVVM TAIVGWHWFD AATYAANWNT
ADTTDGHAII KSILLCLWAF VGVESAAVST GMVKNPKRTV PLATMLGTGL AGIVYIAATQ
VLSGMYPSSV MAASGAPFAI SASTILGNWA APLVSAFTAF ACLTSLGSWM MLVGQAGVRA
ANDGNFPKVY GEVDSNGIPK KGLLLAAVKM TALMILITLM NSAGGKASDL FGELTGIAVL
LTMLPYFYSC VDLIRFEGVN IRNFVSLICS VLGCVFCFIA LMGASSFELA GTFIVSLIIL
MFYARKMHER QSHSMDNHTA SNAH