Gene EcE24377A_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_4540 
SymbolhemE 
ID5588505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp4534742 
End bp4535806 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content56% 
IMG OID640928156 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001465492 
Protein GI157158608 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC TTAAAAACGA TCGTTATCTG CGGGCGCTGC TGCGCCAGCC CGTTGATGTC 
ACTCCAGTAT GGATGATGCG CCAGGCGGGT CGCTATCTAC CGGAATATAA AGCCACGCGC
GCCCAGGCGG GCGATTTTAT GTCGCTGTGC AAAAACGCCG AGCTGGCGTG CGAAGTGACT
TTGCAACCGC TGCGTCGCTA CCCGCTGGAT GCGGCGATCC TCTTTTCCGA TATCCTCACC
GTGCCGGACG CGATGGGGTT AGGGCTCTAT TTTGAAGCCG GAGAAGGTCC GCGTTTTACC
TCGCCAGTCA CCTGCAAAGC CGACGTCGAT AAACTGCCAA TTCCGGACCC GGAAGATGAG
CTGGGTTACG TGATGAACGC GGTGCGTACC ATTCGTCGCG AACTGAAAGG CGAAGTGCCG
CTGATTGGTT TTTCCGGCAG CCCGTGGACG CTGGCAACCT ACATGGTGGA AGGCGGCAGC
AGCAAAGCCT TCACCGTGAT CAAAAAAATG ATGTATGCCG ATCCGCAGGC GCTGCACGCT
CTACTCGATA AACTGGCGAA AAGCGTCACT TTGTATCTGA ATGCGCAGAT TAAAGCCGGT
GCTCAGGCTG TGATGATTTT CGACACCTGG GGCGGCGTGC TTACCGGGCG CGATTATCAA
CAGTTCTCGC TTTATTACAT GCATAAAATT GTTGATGGTT TACTGCGTGA AAACGACGGT
CGCCGCGTAC CGGTCACGCT GTTTACCAAA GGCGGCGGAC AGTGGCTGGA AGCCATGGCA
GAAACCGGTT GCGATGCGCT GGGCCTCGAC TGGACAACGG ACATCGCCGA TGCGCGCCGC
CGTGTGGGCA ATAAAGTCGC GTTGCAGGGT AATATGGATC CGTCGATGCT GTACGCGCCG
CCTGCCCGCA TTGAAGAAGA AGTAGCGACT ATACTTGCAG GTTTCGGTCA CGGCGAAGGT
CATGTCTTTA ACCTTGGTCA CGGCATTCAT CAGGATGTGC CGCCAGAACA TGCTGGCGTG
TTCGTGGAGG CAGTGCATCG ACTGTCTGAA CAGTATCACC GCTAA
 
Protein sequence
MTELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT 
LQPLRRYPLD AAILFSDILT VPDAMGLGLY FEAGEGPRFT SPVTCKADVD KLPIPDPEDE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MYADPQALHA
LLDKLAKSVT LYLNAQIKAG AQAVMIFDTW GGVLTGRDYQ QFSLYYMHKI VDGLLRENDG
RRVPVTLFTK GGGQWLEAMA ETGCDALGLD WTTDIADARR RVGNKVALQG NMDPSMLYAP
PARIEEEVAT ILAGFGHGEG HVFNLGHGIH QDVPPEHAGV FVEAVHRLSE QYHR