Gene EcE24377A_4504 details

Gene Information

• Locus tag: EcE24377A_4504
• Symbol: fabR
• ID: 5587480
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 4498236
• End bp: 4498883
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640928118
• Product: DNA-binding transcriptional repressor FabR
• Protein accession: YP_001465462
• Protein GI: 157158291
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00559066
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGTAA GAGCGCAACA AAAAGAAAAA ACCCGCCGTT CGCTGGTGGA AGCCGCATTT 
AGCCAATTAA GTGCTGAACG CAGCTTCGCC AGCCTGAGTT TGCGTGAAGT GGCGCGTGAA 
GCGGGCATTG CTCCCACCTC TTTTTATCGG CATTTCCGCG ACGTAGACGA ACTGGGTCTG 
ACCATGGTTG ATGAGAGCGG TTTAATGCTA CGCCAACTCA TGCGCCAGGC GCGTCAGCGT 
ATCGCCAAAG GCGGGAGTGT GATCCGCACC TCGGTCTCCA CATTTATGGA GTTCATCGGT 
AATAATCCTA ACGCCTTCCG GTTATTATTG CGGGAACGCT CCGGCACCTC CGCTGCGTTT 
CGTGCCGCCG TTGCGCGTGA AATTCAGCAC TTCATTGCGG AACTTGCGGA CTATCTGGAA 
CTCGAAAACC ATATGCCGCG TGCGTTTACT GAAGCGCAAG CCGAAGCAAT GGTGACAATT 
GTCTTCAGTG CGGGTGCCGA GGCGTTGGAC GTCGGCGTCG AACAACGTCG GCAATTAGAA 
GAGCGACTGG TACTGCAACT GCGAATGATT TCGAAAGGGG CTTATTACTG GTATCGCCGT 
GAACAAGAGA AAACCGCAAT TATTCCGGGA AATGTGAAGG ACGAGTAA 

 

Protein sequence

MGVRAQQKEK TRRSLVEAAF SQLSAERSFA SLSLREVARE AGIAPTSFYR HFRDVDELGL 
TMVDESGLML RQLMRQARQR IAKGGSVIRT SVSTFMEFIG NNPNAFRLLL RERSGTSAAF 
RAAVAREIQH FIAELADYLE LENHMPRAFT EAQAEAMVTI VFSAGAEALD VGVEQRRQLE 
ERLVLQLRMI SKGAYYWYRR EQEKTAIIPG NVKDE