Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4500 |
Symbol | rspA2 |
ID | 5590245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 4492787 |
End bp | 4494001 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640928114 |
Product | starvation sensing protein |
Protein accession | YP_001465458 |
Protein GI | 157156307 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.244455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA TTGCTGCAGA TGTTTTTGTT ACTTGCCCAG GGCGTAATTT CGTTACGCTT AAAATAACCA CTGAAAGCGG ACTTTGTGGA TTAGGAGATG CCACGTTAAA TGGTCGCGAA TTGTCGGTCG CTTCTTATCT GAAAGATCAT CTTTGTCCAC AACTAATTGG CCGCGATGCC AGCCGTATCG AAGATATCTG GCAATTCTTT TATAAAGGTG CTTACTGGCG ACGTGGCCCC GTCACGATGT CAGCCATTTC TGCCATTGAT ATGGCGTTGT GGGATATCAA AGCTAAAGCG GCAAATATGC CATTGTATCA ACTGCTTGGT GGTGCTTCTC GTGAAGGCGT GATGGTTTAT TGCCACACCA CCGGGCGGAC GATTGATGAA GTCCTTGAAG ACTATGCAAA GCACCAGCAG ATGGGCTTTA AGGCGATTCG TGTGCAGTGC GGTGTACCGG GTATGCAAAC TACTTATGGC CTGGCGAAGG GCAAAGGCCT GGCGTATGAA CCGGCAACCA AAGGCCTGTG GCCAGAAGAG CAGTTGTGGT CTTCAGAAAA GTATCTCGAT TTTACGCCGA AGTTATTTGA AGCGGTGCGT AATAAGTTCG GTTTTAACGA ACATCTGTTG CATGACATGC ACCATCGCCT GACCCCCATC GAAGCGGCGC GCTTTGGGAA GAGCATTGAG GATTACCGCC TGTTCTGGAT GGAAGATCCG ACGCCTGCAG AGAACCAGGA ATGTTTTCGT CTGATTCGCC AGCATACCGT GACGCCGATT GCGGTCGGTG AAGTGTTTAA CAGTATCTGG GACTGCAAGC AGTTAATCGA AGAGCAGCTG ATTGACTATA TTCGCACGAC GATCACCCAT GCAGGCGGCA TTACCGGGAT GCGGCGGATT GCCGATTTTG CATCGCTTTA TCAGGTACGT ACCGGTTCGC ATGGCCCTTC AGATTTATCG CCTGTTTGTC ATGCGGCGGC GCTGCATTTT GACCTATGGG TACCAAATTT TGGCGTTCAG GAGTACATGG GCTATTCCGA ACAAATGCTT GAAGTTTTCC CGCACAGCTG GCGCTTCGAG GAAGGTTATA TGCACCCAGG CGATGAACCG GGGCTGGGTA TTTCTTTCGA TGAGAAACTG GCGGCGAAAT ATCCGTATGA CCCGGCGTAT CTCCCCGTCG CACGACTGGA AGATGGCACA TTGTGGAACT GGTAA
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Protein sequence | MKIIAADVFV TCPGRNFVTL KITTESGLCG LGDATLNGRE LSVASYLKDH LCPQLIGRDA SRIEDIWQFF YKGAYWRRGP VTMSAISAID MALWDIKAKA ANMPLYQLLG GASREGVMVY CHTTGRTIDE VLEDYAKHQQ MGFKAIRVQC GVPGMQTTYG LAKGKGLAYE PATKGLWPEE QLWSSEKYLD FTPKLFEAVR NKFGFNEHLL HDMHHRLTPI EAARFGKSIE DYRLFWMEDP TPAENQECFR LIRQHTVTPI AVGEVFNSIW DCKQLIEEQL IDYIRTTITH AGGITGMRRI ADFASLYQVR TGSHGPSDLS PVCHAAALHF DLWVPNFGVQ EYMGYSEQML EVFPHSWRFE EGYMHPGDEP GLGISFDEKL AAKYPYDPAY LPVARLEDGT LWNW
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