Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4492 |
Symbol | |
ID | 5589048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4481843 |
End bp | 4482694 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640928107 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001465451 |
Protein GI | 157157214 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.494011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATCACG ACGTCAGCTA TCTGCTCTCC CGCCTGATCA ACGGCCCGCT GTCCCTGCGC CAGATTTACT TTGCCAGCAG TAACGGCCCG GTGCCCGATC TTGCGTATCA GGTCGATTTT CCACGGCTGG AAATTGTGCT GGAAGGTGAG TTTGTTGATA CCGGCGCTGG AGCAACGTTA GTTCCCGGCG ATGTGCTGTA CGTTGCCGCT GGTGGCTGGA ATTTCCCACA ATGGAAAACA CCCGCTACCA CCTTTAGCGT GCTGTTTGGC AAACAGCAAC TCGGCTTCAG CGTCGTGCAA TGGGATGGCA AACAATATCA AAATCTGGCG AAGCAACACG TCGCCCGACG CGGCCCACGT ATAGGTTCTT TTCTGCTACA AACGCTCAAT GAAATGCAAA TGCAGCCGCA GGAGCAGCAA ACGGCAAGGC TTATCGTAGC CAGCCTGCTT AGCCACTGCC GCGATTTGCT CGGCAGCCAA ATCCAGACCG CCTCACGCAG CCAGGCACTA TTTGAAGCTA TTCGCGATTA TATCGACGAA CGCTATGCCT CCGCGCTTAC CCGCGAATCT GTCGCACAGG CATTCTATAT TTCACCAAAC TATCTCTCGC ACCTGTTTCA AAAAACGGGG GCCATTGGTT TTAACGAATA CCTGAATCAC ACGCGACTGG AGCACGCTAA GACGTTATTG AAAGGCTATG ACCTGAAGGT AAAAGAAGTG GCGCACGCCT GCGGCTTTGT CGACAGCAAC TACTTCTGCC GTCTGTTTCG TAAAAACACC GAACGCTCGC CGTCGGAATA TCGCCGGCAG TACCACAGCC AACTGACAGA AAAACCGACT ACTCCAGAAT AA
|
Protein sequence | MYHDVSYLLS RLINGPLSLR QIYFASSNGP VPDLAYQVDF PRLEIVLEGE FVDTGAGATL VPGDVLYVAA GGWNFPQWKT PATTFSVLFG KQQLGFSVVQ WDGKQYQNLA KQHVARRGPR IGSFLLQTLN EMQMQPQEQQ TARLIVASLL SHCRDLLGSQ IQTASRSQAL FEAIRDYIDE RYASALTRES VAQAFYISPN YLSHLFQKTG AIGFNEYLNH TRLEHAKTLL KGYDLKVKEV AHACGFVDSN YFCRLFRKNT ERSPSEYRRQ YHSQLTEKPT TPE
|
| |