Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4434 |
Symbol | rhaA |
ID | 5587921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4422396 |
End bp | 4423655 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640928049 |
Product | L-rhamnose isomerase |
Protein accession | YP_001465393 |
Protein GI | 157154741 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4806] L-rhamnose isomerase |
TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTC AACTGGAACA GGCCTGGGAG CTGGCGAAAC AGCGTTTCGC GGCGGTGGGG ATTGATGTCG AGGAGGCGCT GCGCCAACTT GATCGTTTAC CCGTTTCAAT GCACTGCTGG CAGGGCGATG ATGTTTCCGG TTTTGAAAAC CCGGAAGGTT CGCTGACCGG TGGGATTCAA GCTACTGGTA ATTATCCGGG CAAAGCGCGT AATGCCAGTG AGCTACGTAC CGATCTGGAA CAGGCTATGC GGCTGATTCC GGGGCCGAAA CGGCTTAATT TACATGCCAT CTATCTGGAA TCAGATACGC CAGTCTCGCG CGATCAGATC AAACCAGAGC ACTTCAAAAA CTGGGTTGAA TGGGCGAAAG CCAATCAGCT CGGTCTGGAT TTTAACCCCT CCTGCTTTTC GCATCCGCTA AGCGCCGATG GCTTTACGCT TTCCCATGCC GACGACAGCA TTCGCCAGTT CTGGATTGAT CACTGCAAAG CCAGCCGTCG CGTTTCGGCC TATTTTGGCG AGCAACTCGG CACACCATCG GTGATGAACA TCTGGATCCC GGATGGTATG AAAGATATCA CCGTTGACCG TCTCGCCCCG CGTCAGCGTC TGCTGGCAGC ACTGGATGAG GTGATCAGCG AGAAGCTAAA CCCTGCGCAC CATATCGACG CCGTTGAGAG CAAATTGTTT GGCATTGGCG CAGAGAGCTA CACGGTTGGC TCCAATGAGT TTTACATGGG GTATGCCACC AGCCGCCAGA CTGCGCTGTG CCTGGACGCC GGGCACTTCC ACCCGACTGA AGTGATTTCC GACAAGATTT CCGCCGCCAT GCTGTATGTG CCGCAGTTGC TGCTGCACGT CAGCCGTCCG GTTCGCTGGG ACAGCGATCA CGTAGTGCTG CTGGATGATG AAACCCAGGC AATTGCCAGT GAGATTGTGC GTCACGATCT GTTTGACCGG GTGCATATCG GCCTTGACTT CTTCGATGCC TCTATCAACC GCATTGCCGC GTGGGTCATT GGTACACGCA ATATGAAAAA AGCCCTGCTG CGTGCGTTGC TGGAACCTAC CGCCGAGCTG CGCAAGTTGG AAGCGGCGGG CGATTACACT GCGCGTCTGG CACTGCTGGA AGAGCAGAAA TCGTTGTCGT GGCAGGCGGT CTGGGAAATG TATTGCCAAC GTCACGATAC CCCAACGGGT AGCGAATGGC TGGAGAGCGT GCGGGCTTAT GAGAAAGCGA TTTTGAGCCA GCGTGGGTAA
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Protein sequence | MTTQLEQAWE LAKQRFAAVG IDVEEALRQL DRLPVSMHCW QGDDVSGFEN PEGSLTGGIQ ATGNYPGKAR NASELRTDLE QAMRLIPGPK RLNLHAIYLE SDTPVSRDQI KPEHFKNWVE WAKANQLGLD FNPSCFSHPL SADGFTLSHA DDSIRQFWID HCKASRRVSA YFGEQLGTPS VMNIWIPDGM KDITVDRLAP RQRLLAALDE VISEKLNPAH HIDAVESKLF GIGAESYTVG SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PQLLLHVSRP VRWDSDHVVL LDDETQAIAS EIVRHDLFDR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTAEL RKLEAAGDYT ARLALLEEQK SLSWQAVWEM YCQRHDTPTG SEWLESVRAY EKAILSQRG
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